Capsella rubella (pink shepherd's-purse): 17890916
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Entry
17890916 CDS
T02984
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17890916
Spliceosome [BR:
crb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
17890916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_1
PPR_long
HAT_Syf1_CNRKL1_N
DUF4522
Motif
Other DBs
NCBI-GeneID:
17890916
NCBI-ProteinID:
XP_006296983
UniProt:
R0G3F5
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MIVTGACDFSSSLSVTSSSFSSAISVSVTAFNISSLSSNPKFINSSSTLFRSLSFSLIHH
RISYSCRSLRRLSSHTVHRNKTQFVSKSSTPTPPLSTAKSTAQRTGTFVEHLTGITESED
ETNEFGDVESARNDIRNVVTGRVETEFEVRELEELPEEWRRSKLAWLCKEVPTHKAVTLV
RLLNAQKKWVRQEDATYIAVHCMRIRENETGFRVYRWMTQQNWYRFDFGLATKLADFLGK
ERKFTKCREVFDDILNQGRVPRESTFHILVVAYLSSSVEGCLEEACRVYNRMIQLGGYQP
RLSLHNSLFRALLSKQGGVLNDHLKQAEFIFHNVVITGLEVQKDIYSGLIWLHSCQDDVD
IDRINSLREEMMKAGFQESKEVVVSLLRAYAKEGGVEEVERTWLELLSLDCGIPSQAFVY
KMEAYSKVGDFAKALKIFREMEKHLGGATVTGYHKIIEVLCKFQQVEYAESLLKEFVESG
KKPLLPSYIEIAKMYFDLGLYEKLEMAFIECLKKCQPSQTIYNIYLDSLVKIGNLEKAGD
VFDEMKNNGTINVNAISCNTLLKGYLDSGKQVQAERIYDLMRLKKYEIEPPVMEKLDYIL
MLKRKEVKRPLSMKLSKEQREILVGLLLGGLQIESDKEKKSHMVKFEFRETSQAHLILRQ
HIHDQFREWLHPLSEFEEDMIPFEFYSISHSFFGFYADNFWPKGQPEIPKLIHRWLSPHS
LAYWYMYGGFKTSQGDIILRLKGSLEGVEKVVKALRGKSMECRVKKKGKVFWIGLQGTNS
ALFWKLIEPYVLEDLKDHLKPASESMGNDGEGEDQRINVESSS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcaccggagcttgcgacttctcgtcatcactctccgtcacctcttcctccttc
tcctccgctatctccgtctctgtcacagccttcaacatttcctctctctcctctaacccc
aaattcatcaactccagctcaactctcttccgttccctttccttctcccttatccaccac
cgtatcagctactcatgccgctccctccgccgtctctcctctcatacggtccataggaac
aaaacccaattcgtctcgaagtcatctacaccgactccaccactctccacggctaaatcc
acggctcagcgaaccgggactttcgtcgaacaccttacaggcattacagaatcggaagat
gaaacgaacgaatttggagatgtggagtcagctaggaacgacataaggaacgtcgtgact
ggtagagtagagacggagtttgaagttagagaattggaagagttgccggaagagtggcga
cgatctaagcttgcctggctgtgtaaagaggttccaacgcataaggccgtgacgcttgtg
aggctattgaatgctcagaagaaatgggttcgtcaagaagatgctacttacattgctgtt
cattgtatgcggattcgtgagaacgaaactggattcagggtgtatagatggatgacacag
cagaattggtatcggtttgatttcgggttagctacaaagctagctgatttcttggggaaa
gaacggaaatttacgaaatgccgggaggtgttcgacgatattttgaatcaagggcgtgtt
ccgagagagtctacatttcatattcttgtagttgcatatctaagtagctcagtagaaggc
tgtctcgaagaagcgtgtcgcgtttacaacagaatgattcagcttggagggtaccaaccg
cgtcttagtttgcataattctttatttagagctctcttgagtaaacaaggaggggttttg
aatgatcaccttaagcaagctgagtttatcttccataatgttgtgataaccgggcttgag
gttcagaaggatatttatagtggactcatatggctgcatagttgtcaagacgatgttgac
atagataggataaactctctaagagaagagatgatgaaggcgggttttcaggagagtaaa
gaagttgtggtttctttactgagagcatatgcgaaagagggaggtgtggaagaagttgag
aggacatggcttgaattgcttagtctagattgtggtataccttctcaggcgtttgtgtac
aagatggaggcttattctaaagtcggcgattttgcaaaagctctgaagatatttagggag
atggagaagcatctaggtggtgcaactgtgactggataccacaaaatcattgaggttcta
tgtaaattccagcaagtggaatatgcagaatctctcttaaaagagtttgtagaaagcgga
aagaaaccgcttctaccgtcatacatcgagatagccaagatgtacttcgatttaggttta
tatgagaagttggagatggcttttattgagtgcttgaagaaatgtcaacctagccagacc
atatataacatatacttggattcactggttaagatcggtaacttagagaaagcaggagat
gtctttgatgaaatgaagaacaacgggacaatcaatgtgaatgctatatcatgcaacacc
cttttaaagggataccttgattctggaaaacaagtgcaggcagagagaatttatgatctg
atgagattgaagaaatacgaaatcgaaccaccggtcatggaaaagcttgattacatcctg
atgttgaagagaaaagaagtgaagagaccgttgagcatgaagctaagtaaagaacagcgt
gagatattggtaggtttgctattaggtggcttgcaaatcgaatcagacaaagagaagaag
agccacatggtcaaatttgaattcagagagacttctcaggctcatctgattctaagacaa
cacatacatgaccagttccgcgagtggctgcatcctttaagcgaatttgaagaggatatg
atacccttcgaattctactccatttcccattcattctttgggttttacgctgataatttc
tggccaaagggtcagccagagattccaaaactgattcatcggtggctctcaccacactca
cttgcttattggtacatgtacggcggctttaaaacatcacaaggtgacattatcttgaga
ttgaagggaagtcttgaaggtgttgagaaggtagtaaaggctctgagaggcaaatctatg
gaatgtcgggttaagaagaaaggaaaagtcttctggatcggacttcagggaactaactcc
gctttgttctggaaactaatagagccttacgtattggaggacttgaaagatcatttgaaa
cctgcttctgaatcaatgggcaatgatggggaaggtgaagaccaaaggatcaacgttgaa
tcaagctcttga
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