KEGG   Capsella rubella (pink shepherd's-purse): 17890948
Entry
17890948          CDS       T02984                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    17890948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crb03400]
    17890948
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     17890948
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st RAWUL WD40_RFWD3
Other DBs
NCBI-GeneID: 17890948
NCBI-ProteinID: XP_006297044
UniProt: R0G396
LinkDB
Position
Unknown
AA seq 754 aa
MHRVGSAGSNGGSVRTRKEKKLTYVLNDTNDSKHCAGINCLDVLKSSVSNDQNYLFTGSR
DGTLKRWAFDEDATFCSATFESHVDWVNDATLAGESTLVSCSSDTTVKTWDGLSDGVCTR
TLRQHSDYVTCLAVAAKNSNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSSNGAN
GPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGSMLVSGGTEKVLRV
WDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDS
VWALACTPSFSHVYSGGRDQCLYLTDLATRESVLLCTKEHPIQQLALQDNSIWVATTDSS
VERWPAEVQSPQKIFQRGGSFLAGNLSFNRARVSLEGLNPPPAYKEPSIIVPGTHPIVQH
EILNNKRQILSKDAAGAVKLWDITRGVVVQDYGKISFEEKKEELFEMVSIPSWFTVDTRL
GCLSVHLETPQCFSAEMYSADLKVSGRPEDDKINLARETLKGLLGHWLAKKKHKPKPQVL
SSGDTLSVKDTKKNQSASKNEDSSAASDPVYPPFEFSSVSPPSIITEGSQGGPWRKKITE
FTGTEDEKDFPLWCLDAVLNNRLPPRENTKLSFFLHPCEGSTVQVVTLGKLSAPRILRVH
KVTNYVVEKMVLDNPLDSLAIDAASVSGGQPQPLFAGNGLLQSGLKSWQKLRPSIEILCN
NQVLSPDMSLATVRAYIWKKPEDLILNYRVAIAR
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgcaccgggttggaagtgccggcagtaatggcgggtctgtccgcactcgcaaagagaaa
aagcttacctatgtattaaatgataccaacgattcaaagcattgtgctggcataaattgc
ttggatgtgctgaagtcgtctgtttctaatgatcaaaattacctcttcactggaagtcgt
gatggcacactcaagagatgggcatttgatgaggatgctaccttttgctcagctacgttt
gagtctcatgttgactgggtgaacgatgctactctggctggtgaaagtactcttgtttct
tgttcttcagacactacggtcaagacatgggacggcttatcagatggagtctgtacgagg
actctccgtcagcattctgactatgttacttgtttggcagttgcggcaaaaaatagtaat
gttgttgcatctggtggcctcggtggggaagtttttatatgggatatcgaagctgctttg
tcaccagttacaaaacctaatgatgctaacgaagatagttcttcttcaaatggtgcaaat
ggtcctgttacaagtttaagaactgttggttcaagcaacaatatctctgtgcagtcatct
ccatctcatgggtacacaccaacaattgccaaaggccacaaggagtctgtgtatgctttg
gcgatgaatgatactgggtcgatgctcgtctctggtggaacagagaaggttttacgtgtc
tgggaccctagaactggttcaaagagtatgaagctgagggggcatacagataatgtgaga
gtgcttcttctggactcaactggcaggttttgcttgtctgggtcctctgattctatgata
agactatgggatctgggtcagcagcgatgtcttcatacctatgcggtgcatacagattct
gtttgggcgcttgcatgcactccatcatttagtcatgtttatagcggtggacgagaccaa
tgtttatacttgaccgacttggcaacaagggagagtgttttgctgtgcactaaggaacat
ccaattcagcaattagctttgcaagataatagtatttgggttgcaactacggactcctct
gtagagagatggcctgccgaagtacagagtcctcaaaagatctttcaacgaggtggctct
ttcttggctgggaatttgtcttttaatagggcgagggtgtctttggaaggactaaatcca
ccccctgcctacaaggagccgtcaataattgttccaggaactcacccgattgtgcaacat
gagattttgaataataaaaggcaaattttatccaaggatgcagctggcgcagtgaaacta
tgggatataactaggggtgttgtggtacaggactatggaaagatttcatttgaagagaag
aaagaagaactgtttgagatggtaagcattccatcatggtttactgtggatacacgactt
ggatgcttatctgtacatttggagactccacaatgcttctctgctgagatgtattcagca
gaccttaaagtttctgggagacctgaagatgataagattaatctagctcgtgaaacactg
aaaggcctgctgggtcactggctggctaagaagaagcacaaaccaaaaccccaagttctt
tcctctggagatacattatctgtaaaagataccaaaaaaaatcaaagtgcatcaaaaaat
gaagacagtagtgctgctagtgatccggtgtatcctccattcgagttttcttccgtctcc
cctccttccatcataaccgagggctctcaaggaggaccatggaggaagaagataaccgag
tttactggaactgaagatgaaaaggatttcccattgtggtgcttggacgctgtcttgaac
aatcgccttccacctagagaaaatacaaaattaagcttcttcctacatccatgtgaaggt
tcaactgtgcaggtggttacactagggaaacttagtgcaccccggatcttaagagttcac
aaggttaccaattacgttgtggaaaagatggttcttgacaatccgttggatagtctagct
attgatgcagcaagtgtttcgggaggacaacctcagccactgtttgcaggaaatggattg
ctacagtctggattaaagtcttggcagaaacttagaccttccattgaaatcttgtgcaat
aaccaggtcttatctccagatatgagtttagcaactgtacgagcatatatatggaagaaa
cctgaggatctaattctcaactacagagttgctatagctagataa

DBGET integrated database retrieval system