Capsella rubella (pink shepherd's-purse): 17890985
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Entry
17890985 CDS
T02984
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
17890985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17890985
Membrane trafficking [BR:
crb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
17890985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
HVO_2753_ZBP
VWA
Motif
Other DBs
NCBI-GeneID:
17890985
NCBI-ProteinID:
XP_023641630
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGTEYPNFPARPASSPFASAPPPGIPPQSGGPPTGSEAVGFRPFPPSASQPTRPFTPSAP
PPAPPVGGMRPGQPSPFVSQIPGSRPPPPSANSFSSTAYGPPGGTPFQRFPSPPFPTTQN
PPQGPPPPQTLAGHFSPPMSLRPQQPMAPAMGPPPQSMTSGLPGANVSPPAADFHMAARP
GFQQPMPPSYPGVGGSQPSFPGYPSKQVLQAPPMPFQTSQGPPGPPPVSSYPPQTGGFAQ
RPNMPAQQNLHPSYAPPSSNVQGLVEDFNSLSLSSIPGSIEPGLDHKSFPRPLDGDVEPN
SFAEMYPMNCHSRYLRLTTSAIPNSQSLASRWHLPLGAVVCPLAETPEGEEVPLIDFGST
GIIRCRRCRTYVNPYVTFTDSGRKWRCNICAMLNDVPGEYFSHLDASGRRMDMDQRPELT
KGSVEIIAPTEYMVRPPMPPIYFFLIDVSISATKSGMLEVVAETIKSCLDNLPGYPRTQI
GFITYDSTLHFYNMKSSLSQPQMMVVSDLDDIFVPLPDDLLVNLSESRTVVEAFLDSLPL
MFQDNVNVESAFGPALRAAFMVMNQLGGKLLIFQNSLPSLGAGRLKLRGDDPRVYGTDKE
YALRLAEDPFYKQMAADCTKFQIGINVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSS
VHGDKLRHELARDLTRETAWEAVMRIRCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAY
AMQLSLEETLLTTQTVYFQVALLYTASCGERRIRVHTSVAPVVTDLGEMYRQADTGAIVS
LYARLAIEKSLSAKLDDARNAIQQKIVKALKEYRNLHAVQHRLGSRLIYPESLKFLPLYG
LAIIKSTPLQGGPADASLDERCAAGFTMMALPVKKLLKLLYPNLFRVDEWLLKPSADHDD
LKDVLKRLPLAAECLDSRGLYIYDDGFRLVLWFGRMLSPDIAKNLLGDDFAAELSRVTFQ
EQGNGMSKKLMSLVKKLRENDPSYHPMCFLVRQGEQPREGFFLLRNLIEDQMGGSSGYVD
WILQLHRQIQQN
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggagtatccaaatttcccagctagacctgcatcctctccattcgcatctgct
cccccaccagggattccccctcaatccggtggaccacccaccggatcagaggctgttggc
tttagaccttttcctccatctgcatcccaacctacaagacctttcacaccatctgctcct
cctccagctccacctgtgggtgggatgaggcctggccaaccttctccttttgtttctcag
attccagggagtagacctccaccgccgtcagctaattccttttcttcaacagcatatggt
cctccaggtggtaccccttttcagcgttttccatctccgccattcccgactacacagaac
cctcctcagggtccaccaccacctcaaactcttgctggtcacttctcccctccgatgtct
cttcgcccacagcaaccgatggctcctgccatgggacctcctccacaaagtatgacatct
gggctacctggagcaaatgtttccccccctgctgcagattttcatatggctgccaggcct
ggttttcaacagccgatgcctccatcttatcctggtgtgggaggttcacagccatctttt
cctggttatccaagcaagcaggtcttacaggctcctccgatgccattccagacatctcag
ggtcctccaggacccccgccagtctcatcgtatcctcctcagacaggaggttttgctcag
cgcccaaatatgccagcacagcagaatctgcatccaagctatgcacctccttccagtaac
gttcaaggcttggttgaagatttcaactcgctatctctttcatctattcctggatcgata
gagccaggacttgatcataaatcattcccaaggccattggatggtgacgtggagccaaat
tcatttgctgaaatgtaccctatgaattgccattctagatatcttcgactgacgactagt
gctataccgaattcccagtctctggcttcgaggtggcatttacctctaggagcagtggtt
tgtccacttgcagagactcctgaaggggaggaagtaccacttattgattttggctcaact
ggcatcatccgctgcagaaggtgccgtacctatgtgaatccttatgtgacttttacagat
tctggaagaaagtggcggtgtaatatctgtgctatgcttaatgatgtgcctggtgaatac
ttctcacatttggatgctagtggccgaagaatggatatggatcaacgacctgagctgaca
aagggaagtgttgaaatcatagctccaactgaatacatggttcggcctccgatgccacct
atctacttcttcctcattgatgtttcaatttcagctactaaaagtgggatgcttgaggtt
gttgctgagacaattaagtcttgtttggataacctgcctggttatcctagaactcaaatt
ggatttattacttatgacagcactttacatttttacaacatgaagtcatctttgagccag
ccgcagatgatggttgtatcagatctggatgatatatttgtcccattgccagatgatctc
cttgtcaatctatctgaatctagaactgtcgtggaagcctttttggacagtctacctttg
atgtttcaagataatgtcaatgtggaatcagcttttggtccggctctcagagcggcattt
atggttatgaaccaacttgggggcaagttgctaattttccagaactcattaccttctctt
ggtgctgggcggctaaagttgcggggagatgatcctcgtgtctatggaactgacaaagaa
tatgcattaaggctagctgaagaccccttctataagcaaatggctgctgattgtaccaag
ttccagatagggattaatgtttatgcattcagtgataagtacactgatattgcctcctta
gggactctagcaaaatacactggagggcaggtgtactattatccaggtttccaatcatct
gttcatggagataagttaagacacgagctggctagagaccttacaagggaaactgcttgg
gaggcagttatgcgtataagatgtggaaaaggaatccgtttctcgtcctaccatgggaac
ttcatgctaaggtctactgacctgctggctcttcctgccgttgactgtgacaaggcgtat
gcaatgcagctatctctggaagagacactgctaacaacccaaactgtgtacttccaagtc
gctttgctatatactgcttcttgcggagagagacgtataagggtacacacatctgttgca
ccagtggttacagatcttggggagatgtatagacaagcagacactggtgccattgtctct
ttatatgctagattagcaattgagaaatctttgtctgcaaaattggatgatgcgcggaat
gcaatacagcaaaagattgttaaagccctcaaagaatatcgtaatcttcacgcggtgcag
catcggttgggatccagattaatatatccggagtctctgaagttcttgccattgtacgga
ttggcaattattaagtccactcctcttcaaggtggccctgctgatgcttctcttgatgag
cgctgtgcggcaggcttcaccatgatggctctgcctgtcaaaaagctattgaagcttttg
tatcccaatttatttcgtgttgacgaatggctcttaaagccatcagcagaccacgatgac
ttgaaggacgtattaaagaggttgcctctggctgcagagtgtttggattctagaggcctt
tacatttatgatgatggttttcggttagttttgtggtttggccggatgctttcacctgac
attgcgaaaaatcttcttggggatgactttgcagcagagctctcaagggttacctttcaa
gagcaagggaatgggatgtcaaagaagctaatgagtttggtaaagaaactgagggagaat
gatccttcatatcaccccatgtgttttctagtgagacaaggagaacaaccccgagaaggc
ttttttctccttagaaatctcattgaggaccagatgggcggttcgagtggttatgttgat
tggatattgcaacttcaccgccaaattcaacaaaactaa
DBGET
integrated database retrieval system
