Capsella rubella (pink shepherd's-purse): 17891029
Help
Entry
17891029 CDS
T02984
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17891029
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
17891029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
17891029
NCBI-ProteinID:
XP_006296869
UniProt:
R0G2U1
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MTTTTPEKTPARPLSVQDWDVLIDDFRDAGAPRDWFTSVFQVDSLVDFALSSLLKRDFPT
PVKLSILVFLDEFSPILFHKCGSETFDRFVDVLRTIVQSPTDGSSGLKEQAMVSFTSVLV
SIDSFSVGHVEGVVDLLLALVNRPNHGFDRQARAVACECLRQLEKAFPGLLSDVAGHLWS
LCQAERTHAVQAYLLLFTTIVYNVVNQKLKVSLLSTSVPLVPFNAPNWMRDQSLVMSQGQ
GLGPDQKELRRTLAFLLESPYLFTSCAMMEFMGMVVPLASALELQASMLKVQFLGMIYSF
DPMLCHVVLLMYSQFPDAFEGQEKEIMRRLMLFSKETQNYLVFRLLALHWLMGLLNKLML
SGELEKRKSVLEMGQKFHPVVFDPLALKALKLDLLVQCSVSSNALSGGDNSKSAGDLLQD
CLVSVSDFKWLPPWSSETELAFRTLHKFLICASTHSDTDPSTTRSLMESSLFQNVQGLLV
DMTLEFQILVPVIVAFIERLINCHKHQWLGERFLQTVDEKLLPKLKKNNLLTAYFPLFHR
IAENDTIPPSRLIELLTKFVISLVEKRGFDVGLKLWDQGTEVLGICRTLMSHHKSSRLFL
GLSRLLSLTCLYFPDLEVRDNARIYLRMLVCIPGQRFKNILKPADAVSPSTHSSTFFSVQ
SPRFRHDPNKSRNLSAYIHLERVIPLLVKQSWSLSLPSLSVGTDGYSIAENKIQVDEVEP
DGSQELQILPEARRIESGKPTLRVMDSKIAEILERLRRYFSVIPDFKHMPGIKVRITCTL
RLDAEPYNSIWGGEAQNIDLEKVDSPPAIFASVLKFSSSAPYGSIPSCRIPFLLGEPHPN
SNAPNEEVSLDIVLVENTLKEEEKDGLRGAPVTVELEPREPTPGLVEVSMEANAENGQMI
QGKLESVPVGIEDMFLKAFAPPDEPEDTLPSYYSDLFNALWEVCGSSSSTAHETFALKGG
KTAAAISGTRSVKLLEVPAETVIQATELRLAPFVVAISGEQLVNIVRDGGIIENIVWKEE
EEEQRDHANADQSSSSSVGGMGLNRGPLRLTYIGYGDDQEVPMTRSRGKMGKIKMLMFLP
QRYHLLFEMEVGEGSTLVQIRTDYWPCLAYVDDYLEALFLQ
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgaccactacgacgccggagaagactccggcgagacctctctctgtccaggactgggac
gttctcatcgacgacttccgagacgccggcgctcctcgcgactggttcacttccgttttc
caggttgattctctggtggacttcgctctctcctctctcctcaagagagacttccctacc
cctgtgaagctctcaatccttgtctttctcgacgaattttccccgattttgtttcataaa
tgtggtagcgagacctttgatcgcttcgtcgatgttctccgtacgatcgtgcaatccccg
acggatggatcgtcgggattgaaggagcaagctatggtttctttcacctctgtgcttgta
tcgattgattctttctctgtaggtcacgttgaaggagttgttgatttgctgcttgcgctc
gttaatcgtcctaaccacgggtttgatcgacaagctcgtgctgtcgcgtgtgagtgttta
cgccagctcgaaaaagcttttcctggtctgctatccgatgtcgctggtcatctttggtcg
ttgtgccaggctgaaagaactcacgccgtgcaagcttaccttctcttgttcactacgatt
gtctacaacgtggtcaatcagaagcttaaggtttcccttcttagtacctctgtaccgttg
gtgcctttcaatgctcctaattggatgcgtgatcagagtttggttatgagtcaaggtcaa
ggattggggccagatcagaaggaactgagacgaacgctggcttttttgttggaatctccg
tatttgttcacgtcttgtgctatgatggaatttatgggtatggttgtgccacttgcatca
gcattggagttgcaggcctctatgctgaaagttcaattcttgggcatgatttattcgttt
gatccaatgctttgtcatgttgtcttgcttatgtactctcagttccctgatgccttcgag
ggacaagagaaagagataatgagacgtcttatgctcttttccaaggagactcagaactat
cttgttttccgcttgcttgcgttgcactggttaatgggtttgctgaataagcttatgttg
agtggggagcttgagaagaggaaatctgttcttgagatgggtcagaagtttcatcctgtg
gtttttgatccactcgctttgaaagcgttgaagcttgatctgctggtacaatgctctgtt
agttccaatgctttgagtggaggtgataacagcaaatctgctggggatttgttgcaggac
tgcttagtatcggtttcagatttcaaatggttgcctccatggagctcagaaactgaacta
gcattccgcactttacacaagtttctgatatgtgcatctacacattctgacactgaccct
tccaccactagaagtcttatggagtctagcctcttccaaaacgtgcaggggttgctggta
gacatgactttggagtttcagatcttggtccctgttattgtggcttttattgagcggttg
ataaactgtcacaagcatcagtggttaggagagcggttccttcagacagtcgatgagaaa
ctgcttcccaaacttaagaaaaacaatttattaacagcttacttcccacttttccatcgg
atagccgagaatgatacaatacctccttctcgattgatagagctgcttacgaagtttgta
atttcacttgttgaaaagcgggggtttgatgtggggttgaaattgtgggatcaaggaact
gaagttcttggcatttgtcgaacactgatgagtcaccataagagctctagattatttctt
ggactctctcgccttctttccctcacatgtctctatttccctgatctagaggtccgagac
aatgctaggatatatctgaggatgctggtctgtatacccggacagagatttaagaacatt
ttgaagcccgcagatgccgtctctccatcaactcattcttctacattctttagtgttcaa
agtcctcgttttcgtcatgatcctaacaaatctcggaacctttcagcttatattcatctt
gaacgggtgatacccctactcgtgaaacagtcatggtcattgtctctaccatctctaagt
gttggaactgatggatatagcattgcagaaaacaaaatccaggtagatgaggttgagcct
gatggcagtcaagaactccagattttgccagaagctcgaagaattgagtcaggaaaacct
acgttaagggtaatggactcaaagattgcagagattctagaaagattaagaaggtatttc
tcagtgattcctgatttcaagcacatgcctggaattaaggttagaataacctgtactttg
agattggatgctgaaccatataacagtatatggggtggtgaagctcagaatatcgattta
gagaaagtcgactcacctcctgcgatttttgcgagcgtgctcaagttctcatcttcagcc
ccgtatggctctattccctcatgccgcatacctttccttctcggtgagcctcatccgaac
agcaatgcacccaatgaagaagtgtctttagacatcgtcctggtagaaaacacgctaaaa
gaggaggagaaagatggcttgagaggagcacctgtaacagtggaactggaacctagagaa
cctacaccaggtttggtcgaggtttcaatggaagcaaatgcagagaatggtcagatgatt
cagggcaaactcgagagtgtccctgttgggatcgaagacatgttcctaaaagcttttgct
ccaccagacgaacctgaagatacattgccgagctactactcagatctattcaatgctttg
tgggaagtgtgtggttcttcgtccagcactgcacacgaaacgtttgcactaaaaggaggc
aaaaccgctgcagcaatcagtgggactcggtcagtaaaactgcttgaagtccctgctgaa
actgtaatacaggccaccgagcttcgcttagcgccctttgtggtggctataagcggagaa
cagcttgtaaacattgtgagagacggaggaattatcgagaacattgtgtggaaagaagag
gaagaagaacaaagggatcacgcaaatgcagaccagtcttcttcgtcctcggtggggggc
atgggattaaaccgaggccctcttcgtctgacatatattggatatggagatgaccaagag
gttccgatgacaaggagcagagggaaaatgggaaaaataaagatgttaatgtttctaccg
cagagatatcatctgctgtttgaaatggaagttggggaaggatcgacattggtgcagata
agaacagattattggccttgcttggcttacgttgatgattacttagaagctttgtttttg
cagtag
DBGET
integrated database retrieval system
