Capsella rubella (pink shepherd's-purse): 17891055
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Entry
17891055 CDS
T02984
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
crb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17891055
03083 Polycomb repressive complex
17891055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crb03036
]
17891055
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
17891055
Histone modification proteins
HAT complexes
HATB complex
17891055
HDAC complexes
Sin3A-HDAC complex
17891055
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
17891055
PRC2.2
17891055
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
17891055
Heterochromatin formation proteins
Other heterochromatin formation proteins
17891055
Chromatin remodeling factors
NuRD complex
17891055
NuRF complex
17891055
NuRF complex (fruit fly)
17891055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
17891055
NCBI-ProteinID:
XP_006300000
UniProt:
R0I8R9
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MESDEAAAASPQATTPSGGTGASLPKKRGRKPKNKDDSQTPSSQQPSGGKMKESGKKTPQ
QPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS
VPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIV
ATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGK
DKSVVLWSIQDHITTAGTSGSILKQTGEGSDKNESPTVGPRGVYHGHEDTVEDVAFSPTS
AQEFCSVGDDSCLILWDARTGTNPVTKVAKAHDADLHCVDWNPHDDNLILTGSADNTVRL
FDRRNLTSNGIGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSD
RAAKSPAGLFFQHAGHRDKVVDFHWNLSDPWTIVSVSDDCETTGGGGTLQIWRMSDLIYR
PEEEVLTELEKFKSHVMTCASKP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgacgaagcagcagcagcgtctcctcaagcaacgacgccgagcggaggaacc
ggagcttctctgccgaagaagagaggccggaaacctaaaaacaaggacgattctcagacg
ccgtcgtcgcagcaaccgagcggtggcaaaatgaaggaaagcgggaagaaaacaccgcag
cagccgagtgtcgacgagaagtactctcagtggaaaggtctcgtccccattctctatgac
tggctcgccaatcataacctcgtctggccttctctctcttgcagatggggtcctcagctt
gaacaagcaacctacaagaatcgccagcgtctgtatctctcagagcaaactgatggcagt
gtgcccaatactctggtcatagcgaattgcgaagttgttaagccaagggttgctgcagcg
gagcacatttctcagttcaatgaagaagcacgttctccatttgtgaagaagtacaagacc
atcattcacccgggagaggttaacagaatcagggaactcccacagaatagtaagattgtt
gctactcacaccgacagtcctgatgttcttatttgggatgttgaaacccaaccaaaccgt
catgctgtgcttggagctgcaaattcccgaccggatttgatactaactggacaccaagat
aatgctgaatttgctcttgctatgtgcccaacagaaccctttgtgctctctggaggcaag
gacaagtcagttgttttatggagtatccaggaccacatcacaactgctgggacttccgga
tctatcctcaaacagactggtgaaggtagtgataagaatgagagccccactgttggcccc
cgaggtgtatatcatggccatgaagatacagttgaagatgtggcattcagcccgacgagt
gcacaagaattctgcagtgttggtgatgattcttgccttatactatgggatgcaaggact
ggcacaaaccctgttacaaaggttgcaaaggcgcatgatgctgatcttcattgtgtcgat
tggaatcctcatgacgacaatctgatcctgacagggtcagcagacaacactgtccggttg
tttgatcgtagaaaccttacctcaaatgggatcggttcgcctatttacaagtttgagggc
cacaaagctgctgttctttgtgttcagtggtctcctgataagtcatctgtttttgggagt
tccgcagaagatggtcttttgaacatctgggattatgacagggtcagtaagaagtctgat
cgtgcagctaaaagccctgctggactcttcttccagcatgctggtcacagggacaaagtt
gtcgatttccactggaatttgtcggacccttggaccattgtcagtgtttctgatgactgt
gagacaactggtggaggtggaacattgcagatatggcggatgagtgacttgatttacaga
ccagaagaggaagtcctgacggaattggagaagttcaagtcgcatgtaatgacttgtgcc
tccaagccttga
DBGET
integrated database retrieval system
