KEGG   Capsella rubella (pink shepherd's-purse): 17891076
Entry
17891076          CDS       T02984                                 
Name
(RefSeq) ras-related protein RABG3c
  KO
K07897  Ras-related protein Rab-7A
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb04142  Lysosome biogenesis
crb04144  Endocytosis
crb04145  Phagosome
crb04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:crb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    17891076
   04145 Phagosome
    17891076
   04142 Lysosome biogenesis
    17891076
   04148 Efferocytosis
    17891076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crb04131]
    17891076
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crb04147]
    17891076
   04031 GTP-binding proteins [BR:crb04031]
    17891076
Membrane trafficking [BR:crb04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    17891076
Exosome [BR:crb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   17891076
  Exosomal proteins of other body fluids (saliva and urine)
   17891076
  Exosomal proteins of colorectal cancer cells
   17891076
  Exosomal proteins of bladder cancer cells
   17891076
GTP-binding proteins [BR:crb04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    17891076
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA ATP_bind_1 RsgA_GTPase Septin cobW nSTAND3 AAA_16 ATPase_2 AAA_7 PduV-EutP NACHT AAA_24 AAA_22 NTPase_1 RNA_helicase G-alpha ABC_tran AAA_14 MCM AAA_5 ATP-synt_ab TniB CATSPERZ_C SRPRB
Other DBs
NCBI-GeneID: 17891076
NCBI-ProteinID: XP_006298562
UniProt: R0I0T2
LinkDB
Position
Unknown
AA seq 206 aa
MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRLFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPF
VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIAKNALKNE
PEEEVYLPDTIDVAGARQQRSTGCEC
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcttctcggcggcgagtgcttctcaaggttattatcctcggagacagtggtgttggg
aagacgtctttgatgaatcagtttgtgaatcgaaaatttagtaatcagtacaaagcaacc
attggagctgatttcttgaccaaagaggttcaaatcgatgacaggttgtttactttgcag
atttgggatactgctggacaagaaaggtttcaaagtctgggtgttgctttctaccgagga
gcagactgttgtgttcttgtgaatgatgtcaatgttatgaaatcgtttgagaatcttaac
aactggagggaagagttcttgatccaggctagtccttcggatcctgaaaacttcccattt
gttgtgttggggaacaagaccgatgttgatggtggaaagagtcgagtggtttctgagaaa
aaggcaaaggcttggtgtgcatccaagggaaacattccttacttcgagacttcagccaaa
gaaggattcaatgtcgatgcagcttttgaatgcatagccaaaaatgctctcaagaatgaa
cctgaagaagaagtgtaccttccggataccattgatgtagctggggctcggcaacaaaga
tcaactgggtgtgaatgctaa

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