Capsella rubella (pink shepherd's-purse): 17891110
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Entry
17891110 CDS
T02984
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
17891110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17891110
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
17891110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
DUF2465
Motif
Other DBs
NCBI-GeneID:
17891110
NCBI-ProteinID:
XP_006296923
UniProt:
R0G3A0
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MEGSIEEQNKLPELKLDAKQAQGFLSFYKTLPNDSRAVRFFDRKDYYTAHGENSVFIAKT
YYHTTTALRQLRSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG
SPGNIGSFEDVLFANNEMQDTPVVVSIFPNFQEGRCVIGMAYVDLTKRVLGLAEFLDDSR
FTNLESSLIALGAKECIFPAETGKSNECKSLYDSLERCAVMITERKKHEFRGRDLDSDLK
RLVKGNIEPVRDLISGFDLATPALGALLSFSELLSDEGNYGNFTIRRYDISGFMRLDSAA
MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVELDEIKTRLDIVQCF
VEEAGLRQDLRQHLKRISDIERLVRSLERKRGGLQHIIKLYQSTIRLPFIKTALQQYSGE
FSSLISERYLKKLEALSDQDHLGKFIDLVEYSVDLDQLENGEYMISSSYDTTLASLKDQK
ELLEQQIHELHKKTAMELDLQVDKALKLDKAPQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDQYQSVVDDYRNCQKELVDRVVQTVTSFSEVFEDLAGLLSEMD
VLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW
FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKKAPTLFATH
FHELTALAQANSEVAGNTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFA
NFPESVVALAREKAAELEDFSPSSMIINNEESGKRKIREDDPEEVSRGAARAHKFLKEFA
AMPLDKMELKDSLQRVREMKDELEKDAADCHWLRRFL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggagggcagtatcgaggagcagaacaagcttccggagctgaaactggatgcaaagcag
gctcaagggtttctctcgttctacaaaaccctaccaaatgactcgagagctgttagattc
tttgatcgcaaggattattatacagctcatggtgaaaattcagttttcatcgcaaagact
tattatcatacaaccactgctttacgtcagcttaggagcggatcaaatgctctttcaagc
gtaagcatcagtaggaacatgtttgaaacgattgctcgggatcttcttctggagcgaaat
gatcataccgttgagctttatgagggaagtggatcgaattggagacttgtgaaaacaggt
tctcctggaaacatcggcagctttgaagatgttttgtttgcaaacaatgaaatgcaggac
acaccagttgttgtctccatatttccaaattttcaagagggcagatgtgttatcggaatg
gcctatgttgatctgactaagcgagttcttggactagctgaatttcttgatgatagtcgt
ttcaccaatctggagtcttcactgattgctctaggcgcaaaagaatgcatttttccagcc
gaaaccggaaagtctaatgaatgcaaaagcctgtatgattctcttgagaggtgtgccgtg
atgataacagagaggaagaaacacgagttcagaggtcgagatttagattcagatcttaag
agattggtaaagggtaatattgaacctgttagagatttgatatctgggtttgaccttgcg
actcctgctctaggtgcattgctctctttctctgaacttctctcggatgagggtaactat
gggaacttcacaatccgcagatatgatatcagtggattcatgagacttgactctgcagct
atgagggcgttgaatgtgatggagagcaaaactgatgctaacaaaaatttcagtttgttt
ggtctcatgaacagaacatgtaccgcagggatgggtaagagactgcttcatatgtggctg
aagcaaccactcgtggagttggatgagattaagacaagattagatatagttcagtgcttt
gttgaagaagctgggttaaggcaagatcttagacagcatctgaagcgaatctcagatatt
gagaggcttgtgcgcagtctcgaaagaaaaagaggtgggttgcagcacattattaaactc
tatcagtcaactataaggcttcccttcatcaaaacagctctgcaacagtacagcggagaa
ttctcatcactcatcagtgagagatacttgaaaaagcttgaggctttatcagaccaagat
caccttggcaagttcattgatttggttgagtactctgtagatcttgaccagctagaaaat
ggagaatacatgatatcgtcaagctatgacaccacattggcatctctgaaagatcagaaa
gaattgctagagcagcagattcatgaattgcacaaaaagacggcaatggaactcgatctg
caggttgacaaggctcttaaacttgacaaagcaccgcaatttgggcatgtcttcaggatc
acaaagaaggaagagccaaagatcaggaagaagctgacgacacagtttattgtgctggaa
actcgcaaagatggagtgaagttcacaaacacaaagcttaagaaactgggggaccagtac
caaagtgttgtggatgattataggaactgtcaaaaggaacttgttgatcgtgtagttcag
actgttaccagtttctctgaggtgtttgaggacttagctgggttactctctgaaatggat
gttttgttaagcttcgctgatttggctgccagttgccctactccatactgtaggccagaa
atcacctcttcggatgctggagatattgtactagaaggaagcagacatccatgtgtagaa
gctcaagattgggtgaattttataccaaatgattgtagactcatgagagggaagagttgg
tttcaaatagtaacagggcctaacatgggagggaagtccactttcattcgccaggttggt
gtgattgtgctgatggctcaagttggttcctttgttccttgtgataaagcatcaatttcc
attagagactgcatctttgcccgtgtaggagcaggcgattgtcaactgcgtggagtatct
acttttatgcaagaaatgcttgaaaccgcatcgatattgaagggcgctactgataagtca
ctgataattatcgatgaacttggtcgtggaacatcaacctatgatggttttggtttagct
tgggctatatgtgagcatctggttcaagtaaagaaagcaccaactctgtttgctactcac
ttccatgagcttactgccttagctcaagcaaactctgaggtagctggtaacaccgttggt
gtggcaaacttccatgtcagcgctcacattgacactgaaagccgcaaacttaccatgctt
tacaaggttgaaccaggggcctgtgaccagagctttgggattcatgtagcagaatttgcc
aacttccctgaaagcgtagtggccctcgcaagagagaaagctgcagaactggaagatttc
tctccgtcttccatgataatcaacaatgaggagagtgggaagagaaagatcagggaagat
gatccagaggaagtatcgagaggggcagctcgggcacacaagtttctgaaagaatttgca
gcgatgccacttgataaaatggagcttaaagattcacttcaacgtgttcgtgagatgaaa
gatgagctagagaaagatgctgcagactgccactggctcaggcggttcctgtga
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