Capsella rubella (pink shepherd's-purse): 17891246
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Entry
17891246 CDS
T02984
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03030
DNA replication
crb03420
Nucleotide excision repair
crb03430
Mismatch repair
crb03440
Homologous recombination
crb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
17891246
03420 Nucleotide excision repair
17891246
03430 Mismatch repair
17891246
03440 Homologous recombination
17891246
03460 Fanconi anemia pathway
17891246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17891246
03032 DNA replication proteins [BR:
crb03032
]
17891246
03400 DNA repair and recombination proteins [BR:
crb03400
]
17891246
Transcription factors [BR:
crb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
17891246
DNA replication proteins [BR:
crb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
17891246
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
17891246
MMR (mismatch excision repair)
17891246
DSBR (double strand breaks repair)
HR (homologous recombination)
17891246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
17891246
NCBI-ProteinID:
XP_006297186
UniProt:
R0HK73
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MPVSLTPNAITAINAGDVNLKPLLQVLDIKMIGRSQERNQERYRFLISDGVSAQHAMVAV
QLNDRVKSGAVDKGSIVQLIDYICSDVKGRKVIVVLNMETLVPQSETIGNPTIFGETDAE
AQKTLSAAGNIPLSNRVGFNEPMVQHSVNKAPPRGINIQNSANSTSSFRPSVQPSYQPPA
SYRNHGPIMKNEAPARVIPIAALNPYQGRWAIKARITAKGDIRRYNNAKGDGKVFSFDLL
DSDGGEIRVTCFNAVVDRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESASTV
ELCPDEDGSIPRQQFSFRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRIL
NLKDESGKAVEVTLWGEFCNRDGRELEEMVNSASHPVLAIKAGKVSDFSGKSVGTISSTQ
LFINPDFPEAHKLRNWFDRGGKDTASFSISRDTMPGGSSRNEIRKNVSQIKEEGLGRSDK
PDWITVKATVSFIKTDSFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECEYRY
LLQVQIQDHTGLTWVTAFQETGEEIMGCPAQKLYALKYELEKEEEFAEIVRDRLFHQYML
KLKIKEESYGDEQRVKMTVVKVDKVNYTSESRFLLDLLVR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgagtttgacaccgaacgcaatcacggcgataaacgccggagacgtgaatttg
aagccgttgttacaggttttagatatcaaaatgataggacgaagccaagagaggaatcag
gagaggtatcgttttcttatttcggatggtgtttcagctcaacatgctatggttgctgtt
cagcttaatgatcgagtcaagtcaggagctgttgataaaggatctatcgttcagttgatt
gattacatttgcagcgatgttaaaggccgcaaggttattgtggtgctgaacatggagacg
ctagtaccacaatctgaaaccattgggaaccccacaatatttggggaaacagatgcagaa
gcccaaaagacactttcagctgcggggaatataccgctttcgaatagggttggttttaat
gaaccaatggttcagcattcagttaataaagcacctcctcgaggcataaacattcaaaat
tcagccaacagtacttcaagtttcaggccatctgttcaaccttcatatcaaccgcctgca
agctacagaaatcatggacccataatgaagaacgaggctccagctcgagtcatccctatt
gctgctctcaatccataccaaggtcggtgggctattaaggctagaataactgcgaaagga
gatatcagacggtataacaatgcaaaaggagatggaaaagttttctcgtttgatctgctt
gattctgatggaggagagattcgggttacctgctttaatgctgttgtcgatcgattctat
gatgttactgaggttgggaaggtatatttgatttcaaagggaagtttgaagcccgcacag
aaaaatttcaaccacttaaagaatgagtgggaaattttcttggagtcagcatcgactgtg
gagctttgccctgatgaagatggctccataccaaggcaacagttctctttccgtccgata
agtgacattgagaacgctgagaacaataccatacttgatgtgattggggttgtgacttct
gtgaacccctcggtaccaatcttgagaaagaatgggatggaaacccataggagaatcctt
aatctgaaggatgaatcgggaaaggctgtagaggtaacattatggggagaattctgtaac
cgagatggtcgggagcttgaagagatggttaattcagcctctcacccggttttagctata
aaagctggaaaagtaagtgacttcagtgggaaatctgtggggacaatctcttcaacgcaa
cttttcataaatccagatttccctgaagctcataaactgaggaactggttcgatcgcggg
gggaaagataccgcatccttctccatctctagagataccatgcctggaggaagttccagg
aatgagataagaaaaaatgtttctcagatcaaagaggaaggccttggaagatcagataag
cctgactggatcactgtgaaagcaaccgtatcattcatcaaaacagatagcttctgttac
acagcttgtcctttgatgatcggagataaacaatgcaacaaaaaggtgacacgttctgga
acaaacaggtggctctgtgaccggtgcaaccaagagtctgatgaatgcgaatacagatac
cttcttcaggtgcagatacaagaccacactgggttgacttgggtaaccgcgtttcaagaa
acaggagaagaaatcatgggatgtccggctcagaagctttacgcattgaaatacgaattg
gaaaaggaggaagaatttgcagagattgttagagacagactgtttcatcagtacatgtta
aagctaaagatcaaagaggaatcatatggtgatgaacaaagagtgaagatgactgtggtg
aaggtagataaggtgaattatacatccgagagtagattcttgcttgatttgctcgtaagg
taa
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