Capsella rubella (pink shepherd's-purse): 17891376
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Entry
17891376 CDS
T02984
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
17891376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17891376
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
17891376
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
HECT type E3
17891376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
17891376
NCBI-ProteinID:
XP_006296888
UniProt:
R0G372
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSTKERDARKLLEQTRMERNRRLLQKQQNSAALKIQKFFRGRR
SMAIERAKVRHDFCETYGSHCQNVDRHCFEPGSSFLRQLLFFFKAQNSEDFVILVETCRL
LHSLVSSSGGIVSLFSGLDYSTEHNLVDFRVKKLAFTCIEAIHQNRNRLKDQLLVTPEEA
SISTTILMEAMALLLDPKLPWVCKIISYLQKRNIFKLVRELVTTAKESPGGQTMTGSILS
LERVLIMIVPHIGSEPCSCPVIDPRWSFSSMILTIPFLWKLFPNLKVVFASPSLSQHYIH
QMAFCIQKGTCVLPLETSPEFPGYACLLGNTLDTANMVLSLPECSLDMAIDIASVATFLL
ETLPPVKSSERESRQSSSDEDDMLIDDVPELVLNKALEQHITNAIDSRFLLQLTNVLFHQ
VLLGMQSYDEDKEALAIGTACSFLYAAFNTLPLERIMTILAYRTELVAVLWNYMKRCHEN
QKWSSMPKLLAYLPGDVPGWLLPLVVFCPVYKHMLMIVDNEEFYEREKPLSLQDIRLLII
ILKQALWQLLWVNPLTQSNTGKSVSNDLSKKNPVELIQNRVGVVVSELLSQLQDWNNRQE
FTSSTDFQADTVNEYFISQAIIEGTRANYILMQAPFLIPFTSRVKIFTTQLATARQSHGS
QGIFARNRFRIRRDHILEDAYNQMSALSEDDLRGSIRVTFVNELGVEEAGIDGGGIFKDF
MEKITRAAFDVQYGLFKETADHMLYPNPGSGMIHEQHLQFFHFLGSLLAKAMFEGILVDI
PFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRFKGDISELELYFVILNNEYGERTE
EELLPGGNDMRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPKEWIDMFNEHE
LQVLISGSVDSLDIDDLRNNTNFAGGYHADHYVIEMFWEVMKSFSTENQKKFLKFVTGCS
RGPLLGFKYLEPAFCIQRAAGSASNESVDRLPTSATCMNLLKLPPYQSKELLETKLMYAI
SAEAGFDLS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctccggcgatccttcgactcggaagcgagttgatttaggtggccggagcacc
aaggagagagatgctcggaagcttctggagcagactagaatggagcgtaatcgtcggttg
ctacagaagcagcagaactctgctgccctcaaaattcagaaattctttagaggtagaaga
tcaatggccattgaacgcgcgaaggtgcgacatgatttttgtgaaacctatgggagtcat
tgccagaatgtcgatagacattgctttgagccaggttcaagtttcctccggcagcttctg
ttttttttcaaggcacagaactcggaagattttgtgatacttgtggagacttgtcgtctt
ctgcacagtctcgtttccagcagtggtggcattgtcagccttttttctggtttggactat
tccactgagcataatttggtggattttagagtaaagaaacttgcatttacctgcatcgag
gctattcatcagaataggaaccgtttaaaggatcagctcttagttactcctgaagaagct
agcatttcaacaactatcttgatggaggcaatggcgttgttgctagatcctaaactgcct
tgggtttgcaaaataattagttatctacaaaagagaaacatattcaaactggtccgcgaa
ttggtcacaacggctaaggaaagccccggaggtcagactatgaccggcagcatcctttca
ctagaaagagtattgataatgatagtaccacatattggcagcgagccatgttcctgccct
gttattgatccacgttggagtttctcatctatgatcctcacaatacctttcttatggaag
ctcttcccaaacttgaaagtggtctttgccagcccaagtctaagtcaacattacattcac
cagatggctttctgtatacaaaagggtacatgtgttctcccactggaaacaagcccggaa
ttccctggttatgcttgtctgcttggtaatacgttggacactgcaaatatggtgttgtca
ctacctgaatgttcattggacatggcaattgacattgcatcagttgcaactttcttattg
gagacgcttcctcctgtgaaatcatcagaaagagaaagcagacaaagctcttctgatgag
gatgatatgttgattgacgatgtaccagaattagtcttgaataaggctctggagcagcat
ataaccaatgctatagactcacgttttcttctgcagttaacaaatgttttgttccatcaa
gttttgcttggtatgcagtcatatgacgaagataaagaagcattagctattggcacagcc
tgttcttttctgtatgcagcattcaacactctccctcttgaacggatcatgacaattttg
gcttatagaaccgagcttgtagctgtgttgtggaattatatgaaacgatgccatgagaat
cagaagtggtcatctatgcctaaactcctagcctaccttccaggggatgttccgggttgg
ctattacctctggttgttttttgtcctgtttataagcatatgcttatgatagttgacaat
gaggagttttatgagagagaaaagccattatcgctacaagatatcaggttgctgatcatt
attcttaagcaggctttatggcagttactatgggtgaatccacttacgcaatctaacact
ggaaaatctgtatccaacgacctctctaagaagaaccctgttgagttgattcagaacagg
gttggggttgtagtctctgagcttctttcacagttgcaagattggaacaaccggcaagaa
ttcacttcctcgactgacttccaagctgatacagtcaatgaatatttcatctctcaggcc
ataatagaaggtacgagagccaactacatactgatgcaagctcctttcttgattccgttt
acaagcagagtcaaaatattcacaacacaattagcaacagcaaggcagagtcatggatct
caaggaatttttgctcgaaatcggttcagaatacgaagagatcatatcttggaagatgct
tacaatcaaatgagtgcattgtcagaggatgatctccgggggtcgattcgggtgacattt
gtcaacgaactcggagttgaggaagctggtattgatggtggtggaatttttaaagacttc
atggagaaaatcacccgagcagcctttgatgtgcaatacgggttgtttaaggagaccgct
gatcacatgctttatcctaatcctggatcaggaatgatacatgaacaacatctccagttc
tttcattttctcggcagtcttctcgcaaaagctatgtttgaagggattcttgttgatata
ccatttgcaacgtttttccttagcaaattgaaacaaaagtacaactatctcaacgatttg
ccttccctggatcctgagttgtataggcacctcatatttctgaagcgttttaagggtgat
atctcagagttggagctttactttgttattttgaataatgaatatggagagaggacagag
gaagagttacttccaggggggaatgatatgcgagttacaaatgagaatgttataactttc
attcatctggtttccaatcatcggttaaattttcagatacgccagcagagttctcatttc
ctgagggggtttcagcaactcatcccgaaagaatggatcgacatgttcaatgaacatgaa
cttcaggttctcatatctggttcagttgatagtttggatattgacgacctgcgaaataac
accaattttgctggaggctaccacgcggaccattatgtgatcgagatgttctgggaagtc
atgaaaagcttctcaactgaaaaccagaagaagttcttaaagtttgtgacgggctgttca
cgagggccactgctcggtttcaaatacttggaacctgcattctgcatacagagggctgcc
ggtagtgcgagtaatgaatcagttgatagactaccgacatcagccacttgtatgaacctt
cttaagcttccgccttatcaaagcaaagagctacttgagaccaagttgatgtacgccata
agtgcagaagcgggttttgatctgagctga
DBGET
integrated database retrieval system
