Capsella rubella (pink shepherd's-purse): 17891380
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Entry
17891380 CDS
T02984
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03015
mRNA surveillance pathway
crb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
17891380
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
17891380
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crb01009
]
17891380
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17891380
03036 Chromosome and associated proteins [BR:
crb03036
]
17891380
Protein phosphatases and associated proteins [BR:
crb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
17891380
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
17891380
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
17891380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
HAM1_C
Peptidase_S49_N
Motif
Other DBs
NCBI-GeneID:
17891380
NCBI-ProteinID:
XP_023642237
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MFKKIMKGGHRKPSKSEANEPSNYGIGHPGRPGSGSNVVVSHASRGALVNSSPSPGAATP
PPPPTGSVEPLPLFRDVPVSERQSLFLRKLQHCCFLFDFTDTIKNAREKEIKRQTLLELV
DFIQSGSSKISESCQEEMIKMISVNIFRCLPPASHENTGQEPADPEEEEPYLEPSWPHLQ
LVYELLLRYVVSTDTDTKVAKRYIDHSFVLKLXLKTILHRIYGKFMVHRPFIRKAINNIF
YRFIYVTERHSGIGELLEILGSIINGFALPMKEEHKLFLIRVLIPLHKPKPIVVYHQQLS
YCIVQFVEKDYKLADTVIRGLLKYWPVTNCAKENLFLGELEEVLEATQPVEFQRCMVPLF
QQIGRCLTSSHFQLSLSERALFLWNNEHIVGLIAQNRSVILLIIYPALEKNIQSHWNQAV
HGLTANIKKMFMEMDHELFEECQRQYEEKQAKSKEVEEQQQYTWKRLAEAAVERDGGGEE
DHMITS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaaatcatgaaaggtgggcatcgaaagccctctaaatccgaagctaatgaa
ccttctaattatggtattggtcatccgggtaggccaggttctgggtccaatgtggttgtt
agtcacgcgtctcgtggtgcattggttaattcgtctccgtcgcctggggcggctactcca
ccacctccgcctacgggctcggtggagccactccccttgttcagagatgtgcctgtttca
gagaggcaatccttgttcttgaggaaacttcagcattgctgtttcctgttcgatttcact
gacacgattaagaacgccagagagaaggagattaagaggcaaacgttgttggagttggtt
gattttatacagtctggatctagtaagatctcagagtcgtgtcaggaagaaatgattaag
atgatttctgttaatattttccggtgtctccctccagcttcacatgagaatactggccaa
gaacctgcagatcctgaggaagaggaaccttatttggaaccttcttggcctcatttgcag
ctagtgtacgaattgctactcagatatgtcgtttctactgacacggatacaaaggtggct
aaacggtatatcgaccattcttttgtgttgaagttgnncttgaaaaccattcttcatagg
atatatgggaagtttatggttcacaggccttttattaggaaagcaatcaacaacatattc
tataggtttatttatgtgacagagagacacagtgggattggggaactcttggagatttta
ggtagtatcataaacgggtttgcgttgcctatgaaggaggagcacaagctattcttaatc
agggtgctgattccattgcataagccaaaaccaattgttgtatatcatcagcagttatct
tattgcatcgttcagtttgtggaaaaagattataaactggcggatacagtaatcagggga
ttgttaaagtattggcccgtgacaaactgcgcaaaggagaatctcttccttggagaactt
gaagaagttcttgaggcaacacagcctgtcgagttccagcgttgcatggttccgttattc
caacagattggtcgctgcctcacgagctctcactttcagctctcactttcagaacgggcg
ctgttcttgtggaacaatgagcacatcgtgggtctaatcgcgcagaaccgaagcgtgatc
cttctaatcatatatcctgcactggagaagaacatccagtctcactggaaccaagcagtt
catggcctaaccgcaaatatcaagaaaatgttcatggaaatggatcatgaactctttgaa
gagtgccagagacagtatgaagagaaacaagcgaaatctaaagaagtggaagaacaacag
caatatacatggaagagattagcagaagcagcggtggagcgagacggaggaggagaagaa
gatcatatgatcacttcctag
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integrated database retrieval system
