KEGG   Capsella rubella (pink shepherd's-purse): 17891410
Entry
17891410          CDS       T02984                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03020  RNA polymerase
crb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    17891410
  09124 Replication and repair
   03420 Nucleotide excision repair
    17891410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crb03021]
    17891410
   03400 DNA repair and recombination proteins [BR:crb03400]
    17891410
Transcription machinery [BR:crb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     17891410
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      17891410
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_4 Ogr_Delta Zn_ribbon_RPAB4 Zn_ribbon_recom
Other DBs
NCBI-GeneID: 17891410
NCBI-ProteinID: XP_006299525
UniProt: R0I7I6
LinkDB
Position
Unknown
AA seq 114 aa
MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHSVSERTQILT
DVASDPTLPRTKAVRCAKCQHREAVFFQATARGEEGMTLFFVCCNPNCGHRWRE
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtactatgaaattttgccgcgaatgtaataacattctgtatcctaaggaggacaag
gagcagaagattctcctctacgcttgccgtaattgcgatcaccaggaagtagctgataac
agctgtgtgtacagaaacgaggttcatcactctgtaagtgaacgaactcagatcctaacg
gatgtggcttctgaccctactcttccccgaaccaaggctgtgcgttgtgccaagtgtcag
catagggaggctgtcttcttccaggctacggctcgaggtgaagaaggaatgacattgttc
tttgtctgctgcaacccgaattgtggtcatcgctggagagaatag

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