Capsella rubella (pink shepherd's-purse): 17891440
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Entry
17891440 CDS
T02984
Name
(RefSeq) ABC transporter E family member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17891440
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
17891440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
DUF5906
RsgA_GTPase
AAA
Fer4_6
AAA_15
Rad17
AAA_23
nSTAND3
NACHT
VapE-like_dom
AAA_16
TsaE
AAA_29
Fer4_9
Fer4_21
AAA_28
AAA_33
SRP54
AAA_30
Fer4_10
Fer4_2
AAA_24
AAA_5
Fer4_7
Fer4_16
ORC-CDC6-like
Fer4_4
Fer4_17
GOLGA2L5
Motif
Other DBs
NCBI-GeneID:
17891440
NCBI-ProteinID:
XP_006299795
UniProt:
R0I859
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MADRLTRIAIVSEDRCKPKKCRQECKKSCPVVKTGKLCIEVAPTSKTAFLSEALCIGCGI
CVKKCPFEAIQIINLPKDLEKDTTHRYGANGFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KILAGKLKPNLGKFNNPPDWEDILTHFRGSELQSYFIRVVEENLKTAIKPQHVDHIKEVV
RGNLGKMLEKLDERGLMEEICDDMELNQILEREARQVSGGELQRFAIAAVFVKKADIYMF
DEPSSYLDVRQRLKAAQVIRSLLRHDSYVIVVEHDLSVLDYLSDFVCCLYGKPGAYGVVT
LPFSVREGINVFLAGFIPTENLRFRDESLTFRVSDTTQETDEEVESYARYKYPNMSKQLG
GFKLEVMEGEFTDSQIIVMLGENGTGKTTFIRMLAGAFPREEGVDSDMPEFNMSYKPQGN
DSKRECTVRQLLHDKIRDAYMHPQFVSDVIRPLQIEPLLDQVVKTLSGGEKQRVAITLCL
GKPADIYLIDEPSAHLDSEQRIAASKVIKRFILHAKKTAFIVEHDFIMATYLADRVIVYE
GQPAVKCIAHSPQSLLSGMNLFLSHLNITFRRDPTNFRPRINKLESTKDKEQKAAGSYYY
LDD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgattgacccgaatcgctatcgtgagtgaggaccggtgcaagcccaagaaa
tgccgccaggagtgtaagaagagctgtcctgttgtaaagactgggaaactttgtatcgag
gttgctcctacctccaagactgctttcttgtcagaggcgctgtgtataggatgtggtatc
tgtgtgaagaaatgcccgtttgaagctattcagattatcaatcttcctaaggacttggag
aaagatacaacacatcgatatggggctaatggtttcaaactgcacaggcttccagttcca
aggccagggcaagtccttgggttggttggaacaaacggtattggaaaatctactgctctc
aaaattttggctggaaaactcaaaccaaatcttggcaaatttaataatcctcctgactgg
gaagatattttgactcacttccgcgggtcagaacttcaaagctatttcatccgagtcgta
gaagagaatctaaagactgctataaagccacaacatgtcgaccacattaaagaagttgtt
cgaggtaatcttgggaagatgcttgagaagctggacgagagaggactgatggaagagatt
tgtgatgatatggagttgaaccagatcctggagcgtgaagcaagacaggtctctggtggg
gagctgcagaggtttgcgattgctgcagttttcgtaaagaaggctgatatatacatgttt
gatgaaccatctagttacctcgatgtgaggcagagactcaaagctgctcaagttatacgc
tcgctcctcaggcatgacagctacgtaattgttgtggagcacgacctcagcgtccttgac
tatctctcggatttcgtttgctgtttgtatgggaagccaggagcatatggtgtcgtgact
ctccccttttctgtcagagaaggaatcaacgtgttcttggccgggtttatccccacagaa
aacttgcgtttcagggatgaatctctgaccttcagggtttctgatactacacaagagact
gatgaagaagtggagtcctatgcaagatacaaatacccaaacatgagtaagcaacttggg
ggtttcaagctggaagtgatggaaggggagttcacagactctcagataattgtaatgctc
ggagagaatggtacagggaaaacgaccttcatccggatgctggcaggcgcattccctcgt
gaagagggtgtagactcggatatgccagagtttaatatgtcgtacaagccgcaagggaat
gactcgaagcgcgagtgtacagtgagacagttgctacatgataagattcgtgatgcatat
atgcatcctcagtttgtgtcagatgtaataagaccgcttcagattgagccgttgttggat
caagtggtaaaaaccctgtcgggtggagagaagcagagggttgccattactctatgcctc
gggaagcctgctgatatctatctgatcgatgagccaagtgcgcatttggactcagagcag
cggatcgcagcttcaaaggtgataaaacggttcatcctgcatgcaaagaaaacagcgttt
attgtggagcatgactttataatggcgacgtatcttgcggaccgagtcattgtgtatgaa
ggacagccagctgtcaagtgtattgctcactcaccacagtcgctgctcagcggaatgaac
ctcttcttatcgcacctgaacatcacattcagacgagatccaacaaacttcaggccaagg
atcaacaagttagagtctaccaaggacaaggagcaaaaagctgcgggctcatactactac
ttagacgattga
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