KEGG   Capsella rubella (pink shepherd's-purse): 17891493
Entry
17891493          CDS       T02984                                 
Name
(RefSeq) coatomer subunit beta'-3
  KO
K17302  coatomer subunit beta'
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crb04131]
    17891493
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:crb04147]
    17891493
Membrane trafficking [BR:crb04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    17891493
Exosome [BR:crb04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   17891493
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_IFT122_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_SPT8 WD_LRWD1 TPR_GEMI5
Other DBs
NCBI-GeneID: 17891493
NCBI-ProteinID: XP_023641515
LinkDB
Position
Unknown
AA seq 914 aa
MPLRLDIKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTITKSFEVTELPV
RSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDSSGKIIWAKHNEIQTANIKSIGAGYEATDGERLPLSVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSSKIKIFSKNFQ
ERKSIRPTFSAEKIFGGTLLAMCSNDFICFYDWAECRLIQQIDVTVKNLYWAESGDLVAI
ASDTSFYILKYNRDLVSSHFDSGRPTDEEGVDDAFEVLHEMDERVRTGIWFGDCFIYNNS
SWKLNYCVGGEVTTMYHLDRPMYLLGYIANQSRVYLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLDKANQILPTIPKEQHNSVAHFLESRGMIEDALEIATDPDYKFDLAIQLGRLEIAKE
IAEEVQSESKWKQLGELAMSSGKLQLAEDCMKYAMDLSGLLLLYSSLGDAEGVSKLACLA
KEQGKNNVAFLCLFTLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVALWREDLSK
VNSKAAESLADPEEYPNLFEDWQVALSVEANTAETRGVYTAAENYPSHADKSSITLVEAF
RNLQVEAEESLENGDINHEVAEENGHVGNEGAEEKQEEEEVNEEEGVVDADSTDGAVLVN
GSEAEEEWVLTPHP
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgcctctcagactcgatatcaagagaaaatttgctcaacgatcagagagagtcaaatct
gtggatctgcatcctacagaaccatggattctagcaagtttgtattctggaaccctgtgt
atttggaactaccagacacagacgattacaaaatccttcgaggtgaccgaattgccagtg
aggtcagccaagtttattccacgcaagcaatgggttgtggctggagctgatgatatgtac
atccgtgtatacaattacaatacaatggacaaggtcaaagtattcgaggctcattcggat
tacattaggtgtgtagctgtccatccaacccttccatatgtgctatcatcttctgatgat
atgctcataaagctttgggactgggaaaatggttgggcttgtactcagatatttgagggg
cattcgcactatgtgatgcaagtggtattcaatccaaaagacaccaacacttttgccagt
gcatcgcttgatcggaccataaagatatggaatcttggttccccagacccaaattttaca
ctggatgctcatcagaaaggagtcaactgcgtagattatttcacagggggtgacaaaccc
tacttaattactggctctgatgatcatactgctaaggtatgggactatcaaaccaagagt
tgtgttcagacgctagatggacacacacacaatgtatctgccgtatgtttccatcctgag
cttccaataataatcacaggttctgaggatggcactgttcgcatttggcactccacgact
tacaggctagaaaacacattgaattacggtcttgagagagtttgggccattggttacatc
aaaagttcgcggcgggttgtgattggatatgatgaaggaaccatcatggttaaacttgga
cgagaaattcctgttgctagcatggacagtagcggaaaaatcatatgggctaagcataat
gaaattcaaactgcaaacatcaaaagtattggtgcaggttacgaggctactgatggagaa
agacttcccttgtctgttaaagagctggggacctgtgatctttatccacaaagcttgaag
cacaaccctaatgggaggtttgtcgttgtttgtggtgatggagagtacataatctacaca
gctttagcttggagaaatagatctttcgggtctgggctggaatttgtttggtcatccgag
ggggaatgtgcagttagagaaagttcatcaaagataaagatattcagtaaaaatttccag
gaaaggaagagtattcggcctactttctcagctgagaagatctttggaggaaccttgtta
gcaatgtgttcaaatgatttcatctgcttttatgattgggctgaatgcaggctgattcaa
caaattgatgtcacagtaaagaatctttattgggccgaaagtggtgatttagtagccatt
gctagtgatacgtcattctacatcttgaagtacaatcgtgacttggtttcctcgcatttt
gatagtggaaggccaactgatgaagagggtgttgatgatgctttcgaggttctccacgaa
atggacgaacgtgtcaggacaggtatatggtttggggactgcttcatttacaacaactct
tcttggaagcttaactattgtgttggaggcgaggtaaccacaatgtatcatttggaccgc
ccaatgtatctgttaggctatattgccaaccaaagccgggtgtacttagtagacaaagaa
ttcaatgtcataggatataccttgctccttagcctgattgaatacaagactcttgtgatg
cgaggcgatttggataaagcgaatcaaattttacctacaattcctaaagagcagcataac
agtgttgctcatttcttggaatctcggggaatgattgaagatgctttagaaattgctaca
gatcctgactacaaatttgatctggccatacaattgggtagacttgaaattgcaaaggaa
attgctgaagaagtacagagcgagtctaaatggaagcagttaggagagttagccatgtcc
tctgggaagctgcaactggccgaggattgcatgaagtatgctatggatttgagtggtttg
ttactactatattcttctttgggagatgctgaaggggtgtcaaaacttgcatgccttgct
aaggaacaggggaagaacaatgttgcctttctttgcttatttacgctgggtagattggaa
gattgtctgcagttattggtagagagtaaccggataccagaagctgcgctgatggcacga
tcttatcttccaagcaaagtttcagagatagtagctctttggagagaagatctcagcaag
gttaattcaaaagcagcagaatctttagctgatccggaagagtacccaaatctttttgag
gattggcaagtagctctttctgttgaagcaaacacagcagagacaaggggagtttatact
gctgcagaaaattatccatcccatgccgataaatcctccattaccctcgtggaagccttt
agaaacctgcaagttgaagcagaggaatcacttgaaaatggagatatcaatcacgaggta
gcagaggaaaacggtcatgtagggaatgaaggagctgaagagaaacaagaagaagaagaa
gtgaatgaagaagagggagtggtggatgcagactctacggatggcgctgtactagttaat
ggaagtgaggctgaagaagagtgggtgcttacaccacatccctag

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