Capsella rubella (pink shepherd's-purse): 17891596
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Entry
17891596 CDS
T02984
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17891596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17891596
03036 Chromosome and associated proteins [BR:
crb03036
]
17891596
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
17891596
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
17891596
RSF complex
17891596
WICH complex
17891596
B-WICH complex
17891596
NORC complex
17891596
BRF complex
17891596
NuRF complex (fruit fly)
17891596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
DUF1509
Motif
Other DBs
NCBI-GeneID:
17891596
NCBI-ProteinID:
XP_023642731
LinkDB
All DBs
Position
Unknown
AA seq
1056 aa
AA seq
DB search
MARISNSDEAFSSEEEEEQVKENEQAEDEEELEAVARSSGSDDDEVAAADESPVSDGEAA
PVEDDYEDEEDEEKAEISKREKARLKEMQKLKKQKIQEMLDSQNASIDADMNNKGKGRLK
YLLQQTELFAHFAKGDASSSQKKVKGRGRHASKITEEEEDEEYLKEEEDGLTGSGNTRLL
TQPSCIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING
PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRDDLLVAGKFDICVTSFEMA
IKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWAL
LNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKET
ILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPY
TTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGN
TGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR
AHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMV
RYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADFYDFD
DDNKDENKLDFKKIVSDNWNDPPKRERKRNYSESEYFKQTLRQGAPAKPKEPRIPRMPQL
HDFQFFNIQRLTELYEKEVRYLMQTHQKNQLKDTIDVEEPEGGDPLTAEEVEEKERLLEE
GFSTWSRRDFNTFLRACEKYGRNDIINIASEMEGKTEEEVERYAKVFKERYKELNDYDRI
IKNIERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMMCMIH
KLGYGNWDELKAAFRTSSLFRFDWFVKSRTSQELARRCDTLIRLIEKENQEFDERERQAR
KEKKLAKSATPSKRPSGRQASESPSPAKKRKHLSMR
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaatttcgaactccgatgaggctttctcgtccgaggaggaagaagagcaggtt
aaggaaaacgaacaagcagaagacgaggaggagctcgaggctgttgctcgttcttctggc
tccgacgatgacgaagtagccgccgctgacgaatcccctgtctccgacggagaagccgcc
cctgtagaagatgattacgaggacgaagaagatgaagaaaaagctgaaatcagcaaacgt
gagaaagccagacttaaagagatgcagaagttgaagaagcagaagattcaggagatgctg
gactcacaaaatgcttccattgatgcggatatgaacaataagggaaaagggagactgaag
tatcttctgcagcaaactgagttatttgcacactttgctaaaggtgatgcatcatcttct
cagaaaaaggtgaaaggaaggggtcgtcatgcgtccaaaataactgaagaggaggaggat
gaagagtatcttaaggaagaagaggatggcttaactggatctggaaacacacggttactc
acacagccctcttgtattcaagggaagttaagagattaccaattagctggtttaaactgg
ctcattcggctgtatgagaatggcataaacggaattcttgcagatgaaatgggtctgggg
aagacgcttcaaacgatttctttgttggcataccttcatgaatacaggggaatcaatggc
cctcatatggtggttgctccaaaatcaacccttggtaattggatgaacgaaattcgccgg
ttttgtcctgtcttacgcgctgtgaaattccttggtaatcctgaggagaggagacatatt
cgagacgacctgctagttgctgggaaatttgatatttgtgtcacaagttttgagatggcc
atcaaagagaaaacagcacttcgtcgttttagctggcgttatattatcatcgatgaagca
catcgaatcaagaatgagaactctcttctttctaaaaccatgagactttttagcaccaat
tatcgacttcttatcacgggaaccccgcttcagaataatctccatgaactgtgggcactt
ctcaattttcttctgcctgagattttcagttcagcagagacttttgatgaatggtttcaa
atttctggtgagaatgatcagcaagaagttgttcaacaacttcacaaggttcttcgacca
tttcttcttcgaagactaaaatcagatgttgagaaaggcttgccaccaaagaaggagacg
atacttaaagttggcatgtcccagatgcaaaaacaatactacaaggctttattgcagaag
gatcttgaagcagttaatgctggtggagaacgaaaacggttgctaaacattgcaatgcaa
cttcgtaaatgctgcaatcacccttatctcttccagggtgcagagcctggtcccccttat
actacaggagatcaccttataacaaatgctggtaagatggttctcttggataaattgctt
cctaagttaaaggaacgtgattcgagggttctgatattttctcagatgacaagacttttg
gatatccttgaggattatttaatgtatcgcggttatctctattgccgtattgatgggaat
actggtggtgatgaacgagatgcctccatagaagcctacaacaagccaggaagtgagaaa
tttgttttcctgttatcgactagagccggagggcttggtattaatcttgctactgcagat
gttgtgatcctttatgatagtgactggaacccacaagttgacttgcaagctcaggatcgt
gctcataggattggtcaaaagaaagaagttcaagtgtttcgtttctgcactgagtctgct
attgaggagaaagtgattgagagagcttacaagaagttggcacttgatgccctggtaatt
caacaagggcgattggcagagcagaaaactgtcaacaaggatgagttgcttcaaatggta
agatatggggctgagatggtgttcagttccaaagatagcacaatcacagatgaggatatt
gatagaatcattgccaaaggagaggaggcaacagctgaacttgatgccaagatgaagaaa
ttcacagaagatgcaatacagtttaaaatggatgacagtgctgacttctatgattttgat
gatgacaataaggatgagaacaaacttgattttaagaaaattgtgagcgataattggaat
gatccaccaaagcgggagagaaagcgaaactactctgaatctgaatactttaagcaaaca
ttgcggcaaggtgctccagctaaacctaaagagcctagaattccgcgcatgccccagttg
cacgatttccagttctttaacatccagagattgaccgagttgtatgaaaaggaagtacgt
tatctcatgcaaacacatcagaaaaatcagttgaaagacacaattgatgttgaagaacca
gaaggtggagatcccttaacagctgaggaagtagaagagaaggagcgattattggaggag
ggtttctcaacatggagtagaagagacttcaatactttccttagggcttgtgagaagtat
ggtcgcaacgacataataaacattgcatctgagatggaaggaaaaacagaggaagaagtt
gaaagatatgccaaagtattcaaagagcgatacaaggagttgaacgactatgatagaatc
attaagaacattgagaggggagaggcaagaatctctaggaaagatgaaatcatgaaagcc
atagggaagaaactggatcgctacagaaacccttggctggagctgaagattcaatatggt
cagaacaaaggcaagctgtacaatgaagagtgcgaccgtttcatgatgtgcatgatccac
aaacttggttatgggaattgggatgagctaaaggcagcattcaggacatcgtctttattc
aggtttgactggtttgtgaaatcccggacgagtcaggaacttgcaagaagatgcgacact
ctgattcgactgatagagaaagaaaaccaagagtttgatgaaagagagaggcaagctcgt
aaagaaaagaagctcgcaaagagtgcaacaccatcaaagcgaccctcaggaagacaagca
agtgaaagtccttcaccggcgaagaagcgaaagcacctgtcgatgagatga
DBGET
integrated database retrieval system
