Capsella rubella (pink shepherd's-purse): 17891643
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Entry
17891643 CDS
T02984
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17891643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17891643
03041 Spliceosome [BR:
crb03041
]
17891643
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
17891643
Spliceosome [BR:
crb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
17891643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
EIF3I
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_VPS8
PKD
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
17891643
NCBI-ProteinID:
XP_006297958
UniProt:
R0G617
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MYGDATNWNEDEYREAILKEREIHTRTVFRTAWAPPARIPNPDAFVVASSDGTLAFHSLN
SLVSQSASYGYSRSQDVMMAEPERVVRAHDGPAYDVKFYGEDDDALLLSCGDDGRVRGWK
WKEFSESEVSLHLQENHVKPLLELTNPQHKGPWGALSPMPEINAISVDRQSGSVFTAAGD
SCAYCWDLESGKIKMTFKGHTDYLHTVVSRSSASQILTGSEDGTTRIWDCKTGKCIRVIG
SQDKKSRIRISSLALDESESWLVCGQGKTLALWNLPASECVSTISIPAHVQDVMFDEKQI
LTVGAEPILRRFDLNGALLSQIQCAPCSVFSISLHPAGVVAVGGYGGLVDVISQFGSHLC
TFRSSLL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtacggagacgctacaaactggaatgaagatgagtatagagaagcaatactgaaggag
cgagagatacatacacgtacagtattcagaaccgcctgggctcctccggcgagaatccct
aatccggacgcctttgttgtcgcctccagcgatgggaccttagctttccattctctgaac
tcgcttgtgtctcaatcggcgagttatgggtactctagaagtcaggatgttatgatggct
gaacctgagagagtggttagggcacacgatggccctgcttatgatgtcaagttctacggt
gaagacgatgatgctttgctcctcagttgtggtgatgatggtagagttcgaggttggaaa
tggaaagaattttctgaatcagaggtgtctcttcacttgcaagagaatcatgtgaagcca
ttgcttgaattgactaatccacaacacaaaggtccgtggggtgctctttcaccaatgcct
gagatcaatgccatttctgttgatcgtcagtcaggaagtgtatttacagcagctggtgat
tcttgcgcatattgttgggatttggagagtggtaaaatcaaaatgaccttcaaggggcat
acagactatttgcataccgtagtttctcgtagttctgcaagtcagatattgacgggttca
gaggatgggactacgagaatctgggattgcaaaacggggaaatgcattagagtaattggt
tcccaggataaaaagtcccgcatccgcattagttctttggccctcgatgaaagtgaaagc
tggttggtttgtggacaaggtaaaactttagctttatggaatcttcctgcctcagaatgc
gtatcaacgatatccatccctgcacatgtacaggatgtgatgtttgatgaaaagcaaatt
ttgactgtaggagcagaaccaattctaaggcgtttcgacttaaatggagctttgctttcc
caaattcagtgcgctccttgttcagtattttccatttccttgcatccagcaggggtagtt
gctgtgggaggttatggaggtcttgttgatgtcatctctcaatttggaagccatctctgc
acatttcgtagcagcttattgtaa
DBGET
integrated database retrieval system
