Capsella rubella (pink shepherd's-purse): 17891659
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Entry
17891659 CDS
T02984
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17891659
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
17891659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
Motif
Other DBs
NCBI-GeneID:
17891659
NCBI-ProteinID:
XP_006296859
UniProt:
R0G2T3
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MKMSNTPEAGDGAPVTTGGLFPVLPTSPKSISAISSTPQWLRNASFTTDLSVINAGASTA
PSVSVVDEDEDEEGDPDGYTFEANQPKVYNLVEEEASWESDDDKGKRKGDKKKKRKSGGT
APDESRSKKSSVRDSDEYYSKPVKDYYLDTRPDPDNLVYGSIYRMNVPRYKLDNSQRVSG
TGSLRFYLRNRRSSMLDTEIDIDSLEGRAKSDTRYWYAKHAAMERNKNFKRIRLSASREA
VDSNFDHFIPLEEGEAVQESDEEDVLSKDSTMGASWEDDVLDKTREFNKMTRERPHDEKA
WLAFANFQDKVSSMQSQKGVRLQTLEKKISILEKAFELNPDSEELLLALLKAYRSRDNAD
ALISRWEKALMQNSASYKLWREFLCVVQGEFSRFKVSEVRKMYSYAIQALSSACNKRHRQ
VDTTSEPLDSAAIQQELVLVDMLVSLCRFEWQAGYQELATALFQAELEFSIFCPSLLLTE
QSKLRLFEHFWSSNGARVGEEGAFGWSLWLEKEEENRHKILKEESSDDNDVGGWTGWTEQ
VSGRNGDSIASANTVEVDVARESLDEEMDDENSKPEDDTEAMLKSLGINVNAAASDEVKD
TSTWVKWFEEEVSRDLSQWMPTRKAGEFSSVDEMGEGEDEEQLSSVVLYEDINGYLFSLR
SDEARLSLVYQFIDFFGAHIPPWTSSNSLSWSEKISSLETLSDSMLENLRSVHECLSKSD
STNGFSLGSLLGGSCDISMRTEMMKFLRNAILLCLNVFPRNYILEEAVLVAEELFVTNMN
TCDAATTPCQALAKRLLKSDRQDLLLCGVYAQREAASGNMKHARRVFDMALTSICGLPKE
LQYNASLLCLWYAESEIANSSLRAKDTESSSRAMHILCYLGSGLAYVPYTSQSSSMQILR
ARQGFREKLKKIQSAWSHGVTDDQSAALVSSAALFEELTNDLSAAVEILEHMFSSVLPGR
KSQSHQLELLFNYYVRMLQRHQDDLTLSQLWKPISEGLQQYPLNPELYRALVDICNRRMT
SHRLRMMFDDYSRKSSSAVVWLFALSYELSKGGSSHRIRGLFERAFAQDTLKNSVILWRC
YIAYEMDIAHNPSAARRIYFRAINACPWSKKLWLDGFRKLSSVLTVKEMSDLQEVMRDKE
LNIRTDIYEILLMQG
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtcgaatacaccagaggccggcgacggagctccggtaactacaggtggattg
ttccccgtccttcctacttcgccgaaatccatctcagctatttccagtactcctcaatgg
ctccgcaacgccagcttcacgacggatctctccgtcatcaacgccggcgcttcgaccgct
ccttccgtatccgtggtcgacgaagacgaagatgaagaaggagatcctgatgggtatact
tttgaagctaatcagcctaaggtttacaatctggttgaagaagaagcgtcctgggagtct
gatgacgacaaggggaagaggaagggggacaaaaagaagaagcggaagagtggtggtact
gcgcctgatgaatctcgttctaagaaatcatcagttagggactctgatgaatactattcg
aagcctgtcaaggattattacttggacactcgtcctgatccagataatctggtttatggt
tccatctacaggatgaatgttcctcgttataaacttgacaattctcaaagagtttctggg
acaggttctctgaggttttatttgcggaatcggcgtagttctatgcttgacacagagatt
gatattgattctttggagggaagagctaagtctgatacccgatattggtatgcaaaacat
gctgccatggaacgcaacaagaatttcaagcggattcgtttatctgcttcaagggaagct
gtggattccaactttgatcatttcattccactggaggaaggtgaggctgttcaagaaagt
gacgaggaagatgttctatcaaaggactcaacgatgggagcatcatgggaggatgacgtg
ctggataaaacgcgagagtttaacaaaatgacgagggagcgtccccatgatgaaaaggca
tggctagcatttgctaactttcaagacaaggtttcaagtatgcaatctcagaaaggagtt
cgcctgcagactttagagaagaagattagtatacttgagaaggcttttgaacttaatcca
gatagtgaagaactgttgcttgcacttctcaaggcataccgaagcagagacaacgccgat
gcattaatcagcaggtgggaaaaggcacttatgcagaattccgctagctacaagttatgg
agggagtttttatgtgttgttcaaggggagttctccagattcaaagtttcggaagtgagg
aaaatgtactcttatgcaatccaggctctttcttctgcttgcaacaagcgccataggcag
gtggatacaacatctgaaccattggattctgctgccatccagcaggaactcgttctagtc
gatatgctagttagtctctgcaggtttgaatggcaggctggttaccaggagttggccaca
gcgttatttcaagctgaactggaatttagcatcttttgtccatctttgttgcttactgaa
caaagtaaattaagactgtttgagcacttttggagcagtaatggtgctcgagttggagaa
gaaggagcttttggatggtcactgtggctggagaaagaggaggaaaacaggcataagatt
ctgaaagaagaatcctctgatgacaatgacgtaggtggttggacaggttggacagaacag
gtctcaggtagaaatggagatagtattgcttccgctaacactgtagaggttgatgttgct
cgagagagtctggatgaggaaatggatgacgaaaatagcaaacctgaagatgatactgaa
gctatgctaaaatcattgggcattaatgtcaatgcagcggccagtgatgaggtcaaagat
acatcaacttgggttaaatggtttgaagaagaggtttctcgagatctcagtcaatggatg
cctactcggaaagctggtgaattctccagtgttgatgaaatgggcgagggagaagatgaa
gagcaactttcaagtgttgtactatatgaagatataaatggatatctattttccttacgt
tcagatgaggcccgactatctctggtataccagtttattgatttcttcggtgcacatatt
cctccatggacttctagcaacagtttgtcgtggagtgagaaaataagtagccttgaaaca
ttgtcagattctatgttagaaaacttgagaagtgtacatgaatgtttgtcgaaatcagat
agcaccaacggtttcagcttgggatctcttttaggtggcagctgcgacatatctatgcgg
actgagatgatgaagtttctccgtaatgccatcttactttgtctaaatgtttttccgcga
aactacattctggaagaagctgtccttgttgcagaagagctttttgtaacaaatatgaat
acatgtgacgcagcaactactccatgccaagctttggccaaacgtctcttgaaaagtgac
cggcaggatctactactctgtggagtttatgcacagcgagaagctgcttctggaaatatg
aaacatgcaagacgagtctttgacatggcactgacttctatctgtggcctccctaaggaa
ttacagtataacgcttcgttgctatgtttatggtatgctgaatcagaaatagcaaatagt
agcctcagagctaaggatacagaatcatcatctcgtgctatgcacattttgtgctacctg
ggaagtggtctagcttatgttccttatacttcccagtcttcaagcatgcaaatccttaga
gcacgccaagggttcagagagaagcttaagaagatacaatccgcatggtctcatggtgtc
actgatgatcaatcagcagctcttgttagttcggcagctctatttgaggagttaacaaat
gatctttctgccgctgttgagatcctagagcacatgttcagttctgttcttccaggaaga
aaaagtcaaagccatcaactcgagctcttgttcaattattatgtgagaatgcttcagaga
caccaggacgatctaactttgtcacaactttggaagcccatatcagaaggactgcagcag
tatcctctcaatccggagctttatcgagctttggtggacatctgtaatcgccgtatgaca
tcccatagactgagaatgatgtttgatgactactcccgcaagagttcatctgccgttgtt
tggctatttgcactttcttatgagttgagtaaaggagggtcctcacacagaatccgtgga
ttgtttgaaagggcatttgcacaagatacactaaaaaactcggtcattctatggcgttgc
tacattgcatatgagatggacatcgcacacaatccatcagcagctagaaggatatacttc
agagctataaatgcatgcccatggtcgaaaaaactatggctggatgggtttaggaagctg
agctcagtccttacggtgaaagagatgtcagatttacaagaagtgatgcgggacaaggaa
ctgaacattaggacagatatctacgagattcttcttatgcagggatga
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integrated database retrieval system
