Capsella rubella (pink shepherd's-purse): 17891663
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Entry
17891663 CDS
T02984
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
17891663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17891663
03051 Proteasome [BR:
crb03051
]
17891663
Membrane trafficking [BR:
crb04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
17891663
Proteasome [BR:
crb03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
17891663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Mod_r
Dsc3_N
Ubiquitin_5
TBK1_ULD
CUE
Rad60-SLD_2
UBA_HOIP
UN_NPL4
Ubiquitin_2
GerD
Motif
Other DBs
NCBI-GeneID:
17891663
NCBI-ProteinID:
XP_006297339
UniProt:
R0G413
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MGGDADSSQPLTAEGGAGGEAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPAN
QQRLIYKGRILKDDQTLLSYGLQADHTVHMVRGFVPSSAPPSAPAANAGNQTTAPAVGSN
NSSNLGGTSPGESLFPGLGFNPLGGGNAMAGLFGSGLPDLEQAQQQLAQNPNMMRDMMNT
PAFQNIMNNPEFMRSMIMNNPQMRELVDRNPELGHVLNDPSILRQTLEAARNPELMREMM
RNTDRAMSNIESMPEGFNMLRRMYENVQEPLMNATTMSGNAGSNTGSNPFAALLGNQGVA
TQGSDATNNSSTPNAETGTGNSIPNANPLPNPWGSTAGQTTASGRTNSGGDARSPGLGGL
GGLGGLGGLGGFGGLGMLGADSPLGATPDASQLNQILQNPAMSQMMQSVLSNPQYMNQLM
SLNPQLRSMLDSNPQLREMMQNPEFLRQFSSPEMMQQMMTLQQSLFSQNRTTAGQDPGQT
GAATGTANNGGMDFLMNMFGSLGAGGLSGTNQPNVPPEERFATQLQQLQEMGFYDRAENI
RALIATNGDVNAAVERLLGGIGQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagatgcagattcgagtcagccgctgactgctgaaggaggagccggaggagaa
gctgtcgccgtcaacgtcaggtgctcgaatggcacgaaatttagtgttacgacgagcctc
gattcgacggtcgagtctttcaaagagttgattgcgcagaacagcgatgtgccagctaat
cagcagcgattgatttataaaggtcggatcctcaaggacgatcagacgctcctcagctat
ggtttgcaggctgatcacaccgttcatatggttagaggctttgtaccttcttcagcacct
ccttctgctcccgctgcaaacgctggaaaccaaaccactgctccagctgttggttcaaat
aatagctctaatcttggaggaacgagtcctggggaatctttgttccctgggcttggattt
aatcctttgggtgggggaaatgctatggctggattatttggttctggtcttccggatctt
gagcaggcacagcaacaactagctcaaaaccctaacatgatgagagatatgatgaataca
ccagccttccagaatataatgaataacccagaatttatgaggagtatgattatgaataac
cctcaaatgcgtgagcttgtagatcgcaatcctgagcttggtcatgtgctcaatgaccca
agcatccttcgccaaactttagaggctgcgagaaaccctgagcttatgcgtgaaatgatg
cggaataccgatagggcgatgagtaacattgagtctatgcctgagggatttaatatgctt
aggcgcatgtatgaaaacgtccaggaaccattaatgaatgctactactatgtctggtaat
gctggaagcaatacaggctctaatccatttgctgctcttctgggaaaccagggggtcgct
acacaaggaagtgatgctactaataattcttcaacaccgaatgctgaaaccggtacaggg
aatagtattccaaatgcaaatccacttcctaatccttggggttctacggctggccagaca
actgcctctggaaggacaaattctggtggggacgcaagaagtcctggacttggtggtctt
ggtggccttggtggtcttggtggacttggtggattcggaggcctcggtatgcttggagcg
gattcacctctaggtgcgactccagatgcttctcaattgaaccaaatactgcaaaaccca
gctatgtcgcagatgatgcaaagcgtactttccaacccacaatacatgaatcagcttatg
agtctcaacccccaactccgaagcatgctagattcaaatcctcagttgagggaaatgatg
cagaaccctgagttccttcgccagtttagctctccagagatgatgcagcaaatgatgact
ctacagcaatcacttttctctcaaaataggaccacggccggccaggatccgggtcaaact
ggtgctgcgacagggacggccaataatggggggatggattttttgatgaatatgtttgga
agtcttggtgctggcggcttgagtggcacaaaccaaccaaacgttccacctgaggagcgt
tttgctacacagttgcaacagttgcaggaaatgggattctacgacagagcagagaacata
agggcattgattgcaaccaatggtgacgttaacgctgctgtagaacgactcttggggggt
attggccagtag
DBGET
integrated database retrieval system
