KEGG   Capsella rubella (pink shepherd's-purse): 17891705
Entry
17891705          CDS       T02984                                 
Name
(RefSeq) TATA-box-binding protein 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    17891705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:crb03000]
    17891705
   03021 Transcription machinery [BR:crb03021]
    17891705
Transcription factors [BR:crb03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    17891705
Transcription machinery [BR:crb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     17891705
  RNA polymerase III system
    TFIIIB
     17891705
  RNA polymerase I system
    SL1/TIF-1B
     17891705
SSDB
Motif
Pfam: TBP DUF3378 DUF4295 Osw5
Other DBs
NCBI-GeneID: 17891705
NCBI-ProteinID: XP_006298592
UniProt: R0I0X2
LinkDB
Position
Unknown
AA seq 200 aa
MADQALEGSNPVDLVKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEYFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDE
TYKAFENIYPVLREFRKIQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggctgatcaagcattggaagggagtaatccagtggaccttgtcaagcatccttccggg
attgttcctactcttcaaaacattgtttctacggtgaatttagactgcaagctcgatctt
aaagccatagctttgcaggctcggaatgctgaatataatcccaagcgttttgctgcggtg
attatgaggatcagagaacccaagactacagcattaatattcgcctcagggaaaatggtc
tgtactggagcaaagagcgaatacttttctaagatggctgcaagaaagtatgctaggata
gtgcagaaattgggattccctgcaaaattcaaggatttcaagattcagaatatcgtaggt
tcttgtgatgtcaaatttcctataagacttgaaggtcttgcttactctcacgctgctttc
tcaagttatgaacccgagctcttcccaggtcttatttacaggatgaaagtgccaaaaatt
gttcttctaatctttgtatctgggaagatcgtgatcacaggagccaagatgagagacgag
acatataaagcctttgagaatatataccccgtcctcagagagttcaggaagatacagcaa
tag

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