Capsella rubella (pink shepherd's-purse): 17891838
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Entry
17891838 CDS
T02984
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
17891838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17891838
03029 Mitochondrial biogenesis [BR:
crb03029
]
17891838
Membrane trafficking [BR:
crb04131
]
Autophagy
Autophagosome formation proteins
ULK complex
17891838
Atg1 complex
17891838
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
17891838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
17891838
NCBI-ProteinID:
XP_006297199
UniProt:
R0G3P4
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MSSSHNRSNNNNSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNFSGDQMICSPSSSSS
SSSSVRPRDKWFNLALRECPAALESFDIGRRSSLEPLVVDVVLVVRPLVGDQMNLSAKRE
LIRNFSEKEYQSGWNSDQDELGCETKNEQIIERWVVQYDNRKIRESVTTSSRRSSSSNKL
QLMYKKATLLLRSLFVMVRLLPAYKIFRELNSSGQIFKFKLVPRVPSIVEPFTRREEAEM
QKFSFTPVETICGRLCLSVLYRSLSDVSCEHSTPMSPTFITDYVGSPLADPLKRFPSLPL
SYGSPPLLPFQRRHSWSFDRHKASPPSVSCSPSPTRSDSHALVSHPCTRHLPPHPSEIPT
GRRKESYPEEYSAYQDFSPPLSPSAPIQAVPRGITRTESAPVRIPAPTFQSKQNIVAPNP
HLKLSRHASLKPVRNFGPGESGPAVDKLFLYGRDDFRKHSGVRPSSNSSPGISFSRSSSR
SFQEDFDDPDFPCPFDVEYDDITDRSSRPGSFDHRGDMHEPLESSGSFPKKSQDAAVGAL
VKMLKKAPPLRQDVSESSIPEICWNNNNKPARAQEIAVASITASGLALTSKTTADALEEL
RSYKEMKNHLLLSQSTSNPSSVTTSPFDV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcacacaacaggagtaacaacaacaattcagaaggtgctaaagcagaacag
atcatatttgagttctttgctaaaagccttcacattattcttgaatcaaggactcctttt
atgtcttcgaggaattttagtggtgaccagatgatttgttccccttcctcttcttcttcc
tcttcctccagtgtcaggcctcgggacaaatggttcaatcttgcccttagggaatgtcct
gcggcgctggagagttttgatatcgggcgcagaagcagtcttgagcctttggttgttgat
gtcgttcttgtggtgaggccacttgttggtgatcagatgaacttgtctgctaaaagggag
cttatcaggaacttttccgagaaagagtaccagtcgggttggaattctgatcaagatgaa
ttgggatgtgaaactaagaacgagcagataattgagagatgggtggtgcagtatgataat
aggaagatcagggaatctgttactaccagcagcaggaggtcaagtagtagtaataagttg
caactgatgtataagaaggcaactctgctgcttaggtcattgtttgtgatggttaggctt
ttgcctgcttataagattttccgggaactcaattcctctgggcagatcttcaagttcaag
cttgttcctagggtcccttctattgttgagccattcactcgcagagaagaggcagaaatg
cagaagttttctttcacacctgttgagactatatgtggtagactttgcttgtcggttcta
tatcgttctctctcagatgtcagttgcgaacactcgactcctatgtctccaacatttata
accgattatgttggaagtcccctggctgatcctttaaagaggttcccttcccttcctctt
tcatatggctcacctcccttgttgccatttcaaaggcgccatagctggagttttgatcgt
cacaaggcgtctccaccttctgtttcttgctcaccatcgcctacacgctcagattcacat
gcattggtttcacatccctgtacccgtcaccttcctcctcacccttctgagatacccacg
ggtcgaaggaaagaaagctaccctgaagagtattctgcttatcaagatttctcccctcct
ctttctccttcagcaccaatacaggctgtcccacgaggcatcacacgtactgaaagtgct
ccagtgagaatcccagctccgactttccagtccaaacaaaacattgtggcacctaaccct
catctaaaattgtcgagacacgcctctttaaagcctgtgagaaactttggtcctggtgaa
tctggaccagcagtagacaagctgtttctttatgggagagatgactttagaaagcattct
ggggtgaggccgtcttccaacagctcaccggggatatcattttcccggagttctagtaga
tctttccaagaagattttgatgatcctgatttcccttgcccatttgatgttgagtatgat
gatattacagatcgtagtagcagaccagggtcgttcgaccacagaggagacatgcatgag
ccactcgagtcaagcggttcattccctaaaaagtcccaagatgctgcagttggtgccctt
gtgaaaatgctgaaaaaagctccacctctcagacaagatgtctccgaatcttccattcct
gaaatttgttggaacaacaacaacaaacctgcacgggctcaggagatagcagtagcgtca
atcacagcctcggggcttgctttgacctcaaagacaacagctgatgctttggaagagttg
aggtcctacaaagaaatgaagaatcatttgttgcttagtcaatccacatcaaacccttcc
tcggttaccacttcaccctttgatgtttga
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