Capsella rubella (pink shepherd's-purse): 17891999
Help
Entry
17891999 CDS
T02984
Name
(RefSeq) phospholipase D zeta 1 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00564
Glycerophospholipid metabolism
crb00565
Ether lipid metabolism
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
17891999
00565 Ether lipid metabolism
17891999
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
17891999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17891999
Enzymes [BR:
crb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
17891999
Membrane trafficking [BR:
crb04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
17891999
Endosome - Golgi transport
Others
Others
17891999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
Motif
Other DBs
NCBI-GeneID:
17891999
NCBI-ProteinID:
XP_006299044
UniProt:
R0G8J0
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MASEQLMSPASGGGRYFQMQPEQFPSMVSSLFSFAPAPTQECNRIFEELPKAVIVSVSRP
DAGDISPVLLSYTIECQYKQFKWQLVKKASQVFYLHFALKKRAFIEEIHEKQEQVKEWLQ
NLGIGDHAPIVQDEDADEVPLHQDESAKNRDVPSSAALPVIRPLGRQQSISVRGKHAMQE
YLNHFLGNLDIVNSREVCRFLEVSMLSFSPEYGPKLKEDYIMVKHLPKFSKSDDDSSRCC
GCCWFCCCNDNWQKVWGVLKPGFLALLEDPFDAKLLDIIVFDVLPVSNGNDGVDVSLAVE
LKDHNPLRHAFKVTSGNRSIRIRAKSSGKVKDWVISINDAALRPPEGWCHPHRFGSYAPP
RGLTDDGSQAQWFIDGGAAFAAIAAAIENAKSEIFICGWWVCPELYLRRPFDSHTSARLD
NLLENKAKQGVQIYILLYKEVALALKINSVYSKRRLLGIHENVRVLRYPDHFSSGVYLWS
HHEKLVIVDNQVCFIGGLDLCFGRYDTFEHKVGDNPSVTWPGKDYYNPRESEPNTWEDAL
KDELDRRKHPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPYEDSIPLLMPQHHM
VIPHYMGRQEESNIECNKDEDSIKGIRRDDSFSSRSSLQDIPLLLPQEPVDQDGSSGGHK
ENGTNNRNGPFSFRKSRVEPVDGDTPMRGFVDDRNGLDLPVAKRGSNAIDSEWWEPQERD
YPVGSPDETGQVGPRTSCRCQIIRSVSQWSAGTSQVEESIHSAYRSLIDKAEHFIYIENQ
FFISGLSGDDTIKNRVLEALYKRILRAHNEKKSFRVVVVIPLLPGFQGGIDDSGAASVRA
IMHWQYRTIYRGQNSILNNLYNTIGPKAHDYISFYGLRAYGKLSEDGPVATSQVYVHSKI
MIIDDRAALIGSANINDRSLLGSRDSEIGVLIEDTELVDSRMAGKPWKAGKFSSSLRLSL
WSEHLGLRSGEIDQIIDPVSDSTYKDIWMATAKTNTMIYQDVFSCVPNDLIHSRMAFRQG
ISYWKEKLGHTTIDLGIAPEKLESYHNGDIKRSDPMDRLKSVKGHLVSFPLDFMCKEDLR
PVFNESEYYASPQVFH
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgagcagttgatgtctcccgccagtggtggaggacgctactttcagatgcag
cctgagcagtttccttctatggtctcttctctcttctctttcgcgccggctcctacgcag
gagtgtaatcgtatttttgaagaattgcccaaggcagttattgtctccgtctctcggcct
gatgctggcgatatcagccctgtactattgtcttacaccattgagtgccaatacaagcag
ttcaagtggcaacttgtgaagaaagcatctcaagtattttatttgcattttgcattgaag
aaacgtgcatttattgaagagattcacgagaagcaggaacaggttaaagaatggcttcaa
aatctaggaataggggatcatgcacccattgtgcaagatgaagatgctgatgaagttcca
cttcatcaagatgagagtgccaaaaatagagatgttccctcaagcgctgctttgccagtc
attcgtcctttgggaagacagcagtccatatcagttagaggaaagcatgcgatgcaagaa
tatttgaatcattttttagggaatcttgatatcgtcaattcacgggaggtttgcaggttt
ttggaggtctcgatgttgtcattctcaccagagtatgggcccaaattgaaagaagactat
attatggtcaaacatctaccaaaattttcaaagagtgatgatgattccagtagatgctgt
ggatgctgttggttctgttgctgcaatgataactggcaaaaggtgtggggggtactaaag
cctggttttctcgccttattggaagatccatttgatgctaagctattagatataattgtt
tttgatgtcctaccagtttctaatggaaatgatggtgtggatgtatcactagcagtagaa
ctgaaggatcataatcctttgcggcatgcatttaaggtaacatctggaaaccggagtata
agaataagggcaaagagtagtggaaaagttaaagattgggtgatttctatcaacgatgct
gcgcttagacctcctgagggttggtgccatccccatcgctttggctcatatgctccccca
aggggtttgacggatgatggaagtcaggcgcaatggtttatagatggtggagcagctttt
gcagccattgctgcagccattgaaaatgctaaatctgagattttcatctgtggctggtgg
gtgtgcccagaactctatcttaggcgcccttttgactcgcatacttctgccagacttgat
aacttgttggagaataaagctaagcaaggagttcagatatacatccttctctacaaagag
gttgctcttgctttaaaaatcaacagtgtatatagcaaacggaggcttcttggcattcat
gagaatgtgagggtacttcgttatcctgatcatttctcaagtggtgtctacctctggtct
caccatgaaaaactcgtcatcgtcgataatcaggtttgctttattggagggctggacttg
tgttttggccggtatgacacgtttgaacataaagttggagataacccatctgtgacatgg
cctggaaaggactattataaccccagagagtctgaacccaatacttgggaggatgctctt
aaagatgaattagaccgtagaaaacatccacggatgccttggcatgacgtgcattgtgct
ttatggggaccaccttgccgtgacgtggctaggcactttgttcaacgctggaattatgct
aagagaaacaaagcaccatatgaggattcaattccgcttcttatgccccagcatcacatg
gttataccccactacatgggaaggcaagaggagtcaaacattgaatgcaataaagacgaa
gacagcattaaagggattagaagagatgattcgttctcttctagatcatctttgcaggac
attcctttacttttgcctcaagaacctgttgatcaggatggttcgagtggggggcataaa
gaaaatggaacaaacaatagaaatggtcctttctctttccgtaaatcgagagttgaacca
gttgatggagatactcctatgagggggtttgtagatgatcgtaatgggctagatcttcca
gtagcaaaacgtggttctaatgcaatagattcagagtggtgggaaccacaagaacgtgac
tatccggttgggtcaccagatgagactgggcaagttggtccgagaacttcatgccgctgt
cagattatacgaagtgtcagtcagtggtctgctggaacaagccaagttgaagagagtatc
cattctgcttaccgttctctcattgacaaagctgaacattttatctacattgagaatcag
tttttcatatcaggactttctggagatgacacaataaagaaccgtgtcttagaagcattg
tacaagaggattttgcgtgctcataacgagaagaaaagtttcagggttgttgttgttata
cctctcctcccaggtttccagggaggtattgacgacagtggtgcagcatctgttagagcc
ataatgcattggcagtatcgaaccatatacaggggacagaactcaatactgaataatctt
tacaatactattggcccaaaggctcatgattatatttccttctatggccttagggcatat
ggtaaactttctgaggatggacctgtcgccactagtcaggtgtatgttcacagtaaaatc
atgataattgatgaccgcgccgcattgattggatctgccaatatcaacgatcggagttta
cttggctcaagggattcggagattggagtactaatcgaagacacagagttagtagattcc
cgcatggcaggaaagccatggaaggctggaaaattttcttcaagtctgaggctctctctg
tggtccgagcaccttggacttcgtagtggagagattgatcagattattgatcccgtctct
gattcaacctacaaggatatatggatggcaactgcaaagacaaacacaatgatatatcag
gatgtcttctcttgtgtgcccaatgatctcatccattcaagaatggccttcagacaaggc
atatcgtattggaaagagaaactgggacacacaacgattgacttaggaatagcacccgag
aagctggaatcttatcataacggagacatcaagagaagcgatccaatggacagactaaag
tcagtaaagggacatctcgtctcattccctttagatttcatgtgtaaagaagatctaaga
cctgtcttcaatgaaagtgaatactacgcctcccctcaagtcttccattga
DBGET
integrated database retrieval system
