Capsella rubella (pink shepherd's-purse): 17892143
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Entry
17892143 CDS
T02984
Name
(RefSeq) cell division control protein 48 homolog A
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
17892143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17892143
03009 Ribosome biogenesis [BR:
crb03009
]
17892143
04131 Membrane trafficking [BR:
crb04131
]
17892143
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17892143
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
17892143
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
17892143
Membrane trafficking [BR:
crb04131
]
SNARE
SNARE associated proteins
Others
17892143
Autophagy
Aggrephagy
Other aggrephagy associated proteins
17892143
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
17892143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
Parvo_NS1
AAA_18
IstB_IS21
Vps4_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
AAA_lid_PRS2_C
NB-ARC
TsaE
AAA_24
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
17892143
NCBI-ProteinID:
XP_006297006
UniProt:
R0HJL6
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MSTPAESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDT
ILIKGKKRKDTVCIALADESCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVV
APDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWN
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSGGGGDGGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNI
FKACLRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSEN
PEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFEN
SAGSGATTGVADPFATSAAAAADDDDLYN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccccagctgaatcttcagactcgaaatcgaagaaagatttcagtactgctatt
ctggagaggaagaagtctccgaaccgtcttgtcgtcgatgaggctataaacgatgataac
tccgtcgtatctcttcaccctgcgaccatggagaagctacagctcttccgtggtgatacc
attctcatcaagggtaagaaaagaaaggacactgtgtgcattgctcttgctgatgaatca
tgtgaggaaccaaagatccgaatgaacaaagtagttagatctaacttgagggttagactg
ggagatgttatttctgttcaccaatgcccagatgtcaagtatggaaaacgtgtgcacatc
ctgccagttgatgataccgttgaaggggttactggaaacctctttgatgcttacctgaaa
ccttatttcctggaggcataccgcccagtgaggaagggtgatctcttcctagtcagaggt
ggaatgaggagtgtggagttcaaagttatagagaccgatcctgctgaatactgcgtggtt
gctccagacacagagattttctgtgagggcgagcctgtgaagagagaggatgaagagagg
ctagatgatgtaggttatgatgatgttggtggagtcaggaagcagatggctcagatcagg
gaacttgttgaacttccattaaggcatccacaactattcaagtcaattggtgttaagcca
ccaaagggaattctgctttatggaccacctgggtctggaaagactttgatagctcgtgcc
gtggctaatgaaacaggtgcctttttcttctgtatcaatggaccggagatcatgtccaaa
ctggctggtgagagtgagagcaacctcaggaaagcatttgaggaggcagagaaaaatgcg
ccttcgatcatattcattgatgagattgactctattgcaccaaagagagagaagacaaat
ggagaggtcgagaggaggattgtgtctcagctccttacgctcatggatggactcaaatcg
cgtgctcatgttattgtcatgggagcaaccaatcgtcccaacagtattgacccagctcta
agaaggtttggaagatttgatagggagatcgatattggggttcctgacgaaattggtcgt
cttgaagtgctgaggattcatacaaagaacatgaagcttgctgaagatgtggatcttgaa
aggatctcaaaggacacgcatggttatgtcggtgctgatcttgcagctctgtgcacagag
gctgccttgcaatgcatcagagagaagatggatgtgattgatttggaagatgactctatt
gatgctgaaatcctcaattccatggcagtgaccaatgaacacttccacactgctctcggg
aacagcaacccatctgcccttcgtgaaaccgttgtggaggttcccaatgtctcatggaat
gatattggaggtcttgagaatgttaagagagagctccaggagactgttcaatacccagtt
gagcacccagagaaatttgagaaattcgggatgtctccatcaaagggagtccttttctac
ggtcctcctggatgtgggaaaacccttttggccaaagctattgccaacgagtgccaagct
aacttcattagtgtcaaaggtcctgagcttctgacgatgtggtttggagaaagtgaagca
aatgtccgggaaatctttgacaaggcccgtcagtctgctccatgtgttctcttctttgat
gagctcgactccattgcgactcaaagaggaagcggaggcggaggtgatggaggcggtgct
gcagatagagtcttgaaccagcttttgactgagatggatggaatgaacgccaagaaaacc
gtcttcatcatcggcgcaaccaacagaccggacatcatcgattcagctcttcttcgtcct
ggaaggctcgaccagctcatttacattccactaccagatgaggattcccgtctcaacatc
ttcaaggcctgcttgaggaagtctcctattgctaaagatgtagacatcggtgcccttgct
aaatacacacagggattcagtggtgctgatatcactgagatttgccagagagcttgcaag
tacgccatcagagaaaacattgagaaagacattgaaaaggagaagaggaggagcgagaac
ccagaggctatggaggaagatggtgtggatgaagtatcagagatcaaagctgcacacttt
gaggagtcgatgaagtatgcgcgaagaagtgtgagtgatgcagacatcaggaagtaccaa
gcctttgctcagacgctgcagcagtctagagggtttggttctgaattcaggtttgagaat
tctgctggttcaggtgctaccactggagtcgctgatccgtttgccacttctgcagcggct
gctgcggatgatgatgatctctacaattag
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integrated database retrieval system
