Capsella rubella (pink shepherd's-purse): 17892199
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Entry
17892199 CDS
T02984
Name
(RefSeq) polyadenylate-binding protein 6
KO
K13126
polyadenylate-binding protein
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03015
mRNA surveillance pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
17892199
09123 Folding, sorting and degradation
03018 RNA degradation
17892199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17892199
03041 Spliceosome [BR:
crb03041
]
17892199
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
17892199
mRNA cycle factors
Stress granule specific factors
17892199
Spliceosome [BR:
crb03041
]
Complex C
Other components
Complex C specific factors
17892199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_5
RRM_RdRP1_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
17892199
NCBI-ProteinID:
XP_023642008
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MALVESETKALGNQQQHSAKFASLYVGDLSPDVTEQDLIQKFSFTVPVSSVHLCRNSVTG
KSLCYAYINFDSPYSASNAMACLNHTDLKEKAMRIMWSQRDLQYRRRTGFGNLYVKNLDS
SITSICLERMFCPFGVVLSCKVAEENGQSKGFGFVQFETEQSAVAARTALHGSVVDGKKL
FVAKFINKNERAAMAGNQEFTNVYVKNLMENVTEDDLHSLFSQYGTVSSVVVMRDGMGRS
RGFGFVNFCNPVNAKKAVESLDKQKLGSKSLFVGLALKYDERKEMLKQKYRGNFIAKSNM
GWSNLYVKNLSESMNETRLREIFGSYGQIVSAKVMRHENGKSKGFGFVCFSNCEASKQAK
RELNGFSADGQPFVVRVAERKEDRLKRLQQYFHGQPHHYTQVPPVPSPAQPVFPSVPSSF
HGQPRHTQVPPVPSPAQPVPPSVPSSFHGQPRLYTQAPPVSSPAQPVLPSVPSSSYSYLQ
PFHYGTSYYYMGAQLPQMFSHQNISTYVPAGQAPLKEKRSVHLVYKHPAYYPSAKSGAKQ
KLVFKAEGNQTLEAAKATKSAEKHREASSALKAMLSPKVKKAEKSGKQIALIEAA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgtggaatctgaaacgaaggcgttggggaatcaacagcagcattctgcaaag
tttgcttcgctttacgtcggtgatcttagcccagacgtgacggagcaagatctcatccaa
aaattctcttttactgttcctgtctcctccgttcatctttgccgtaactccgtcaccgga
aaatccttgtgttacgcttacatcaactttgattcaccttacagcgcatcgaatgctatg
gcgtgcttaaaccatactgatttgaaggagaaggctatgcgaataatgtggtctcagagg
gatcttcaataccgtcgtcgtactgggtttggaaatctatacgtcaagaatcttgacagc
tcgatcactagcatttgcttagagcgaatgttttgcccctttggagtcgtactctcttgc
aaagtcgctgaagagaatggacaaagtaaaggttttgggtttgttcagtttgaaacagag
caatctgctgtagctgctcgtactgccctccatggctctgtggttgatggcaagaaactg
tttgtagccaagttcatcaacaagaatgaaagagcagctatggcaggaaatcaagaattc
acaaacgtttatgttaaaaacctgatggaaaatgttacagaggatgatctacatagtctg
ttttctcaatatgggacagtctcaagtgttgtggttatgagggatggtatgggaagatct
agaggtttcggatttgtcaacttctgcaatccagtaaatgctaagaaagctgtggaatct
cttgataaacaaaaacttggatcaaagagtttgtttgttggattggcactgaaatatgat
gaaaggaaggagatgctgaaacagaaatacaggggaaactttattgccaagtctaacatg
gggtggtccaatctgtacgtgaagaacttgagtgaatcaatgaatgaaacaagactgcga
gaaatatttggaagctatgggcagatagtctcagctaaagtgatgcgtcatgagaatggt
aaaagtaaaggattcggctttgtgtgtttctctaactgtgaagcgtccaaacaggctaaa
agagagctcaatgggttttcggctgatggacaaccatttgttgttcgagttgctgagaga
aaagaggatcgactcaagaggttgcagcaatactttcatggacaaccacatcattacacg
caagttcctcctgtcccttcaccagctcaaccagtctttccatctgtgcccagcagcttt
catggacagccacgtcacacacaagttcctcctgtcccttcaccagctcagcctgtcccc
ccatctgtgcccagcagctttcatggacagccacgtctttacacgcaagctcctcctgtc
tcttcaccagctcagcctgtcctcccttctgtgcccagcagctcatatagttacttgcag
ccattccattacgggacatcttattactatatgggcgctcagttaccacaaatgtttagc
caccaaaacatctccacctatgttcccgctggccaggctcctctgaaggagaaaagatca
gtacacctagtctacaaacacccggcttattatccctctgccaaaagtggtgccaaacag
aaactggtctttaaggctgagggtaaccaaactttagaggctgcaaaagcaacaaaatct
gctgagaaacatagagaagcatcatccgctttgaaagcaatgttgtcaccaaaagtgaag
aaggcagagaaatcaggaaaacaaattgcactgattgaagctgcttaa
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integrated database retrieval system
