Capsella rubella (pink shepherd's-purse): 17892314
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Entry
17892314 CDS
T02984
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17892314
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
17892314
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NuBaID_C
Beta_helix
DUF4135
Motif
Other DBs
NCBI-GeneID:
17892314
NCBI-ProteinID:
XP_023642066
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MGSYFGISTIFVVCLLGLSANGHEVFRIGSPPGSDITQAFFKAFKAACQAPTPSKVLIPK
GQFRLGEIIMEGPCKFPIEFTLLGTVQADGNAGQGKDKWVVFRKMNGFKLNGGGTFDGQG
TAAWRVNNCHQTKSCKKLPISLRFDFVTNAVIRDISSVDSKNFHVNVIGARNMTFDNVKI
LAPAESPNTDGIHLGRSDGVSIINSRISTGDDCVSVGDGMVNLLVKNVLCGPGHGISVGS
LGRYGHEENVRGIRVINCTVQETDNGLRIKTWPSAACSTTASDIHFEDIILRNVSNPILI
DQEYCPWNHCNKQKSSSIKLANISFRKIRGTSGNKDAVKLLCSKGYPCENVVVGDIDIQY
TGADGPATFMCSNVRPKLVGIQNPKACNTPPVLTQPK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggggtcatattttggaatttctacaattttcgttgtatgtctgctaggattatcagcc
aatggtcatgaggtgtttagaattggttctcctccaggttctgatattactcaggcattt
ttcaaagcattcaaagcggcatgccaagctccgacaccgagcaaagtgttgatcccaaaa
ggacagttcaggctcggtgagatcattatggaaggtccatgcaaatttccaatcgagttc
accttgctaggcactgtccaagctgacgggaacgctggccaaggaaaggataaatgggtt
gtcttccgaaaaatgaatgggttcaagttgaacggaggtggaaccttcgacggtcaaggt
accgcagcttggagggtcaataactgtcaccagactaagtcctgcaagaaacttcccatc
agtttgagatttgatttcgtgacgaatgctgtgatcagagacatatcctcagtggattcc
aagaacttccacgtcaacgtgatcggagccaggaacatgacctttgacaacgtcaagatc
ttggctccagcagagagccctaacactgacgggatccacttgggaagaagtgacggagtt
agcatcattaactctaggatctccaccggagatgactgtgtctccgtcggggacgggatg
gtgaatcttctcgtaaagaatgtcttgtgcggtcctggacatgggatcagtgttggaagc
cttggaaggtacggacacgaggagaacgtcaggggaattagggttatcaactgcaccgta
caagagactgacaacggcctccgaatcaagacatggccctccgcagcttgctccaccacc
gcctccgatattcattttgaggacattatccttagaaacgttagcaacccaatcctcatt
gaccaggagtactgtccttggaaccactgcaacaagcaaaaatcatcatccattaagctg
gcaaacataagcttcaggaagataagagggacatcaggaaacaaggatgcagtgaagcta
ttgtgcagcaaaggttatccgtgtgagaacgttgtggttggagacattgacattcagtac
actggagccgatggtccagccactttcatgtgctctaacgtaaggcctaagcttgtggga
attcagaacccaaaggcttgcaacaccccaccagtgttgacccaacctaagtaa
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