Capsella rubella (pink shepherd's-purse): 17892414
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Entry
17892414 CDS
T02984
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17892414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17892414
03036 Chromosome and associated proteins [BR:
crb03036
]
17892414
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
17892414
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
17892414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
17892414
NCBI-ProteinID:
XP_006299942
UniProt:
R0I4C1
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MDDISSTASNVARAILAVLDYSSTSDTRKSAVEFLESIKSGDVRVLANISFHFVKKEWSP
EIRLHAFKMLQHLVRLRWDELSPPECTDLVNVSVELMSEVANACENWPLKSQSAALVAEI
VRRQAPDLWQEIFTLLTSLSAQGPLQAELVLMTLRWLPEDITIHNDDLEGDRRRLLLRGL
TQSLPEILPLLYNLLERHFGAAICEARRKHVDLAKQHADVVIACLNAIMAYADWAPVPDL
ARYGILSGCNFLLSSPDFRLHACEVFKLVCSRKRPSDASTAEFDSAISNLFQILTNVSRE
FLCRSSSSSSVIDENDYVFAECICESMASLGSTNLQCISSDGGVMAVYLQQMLGFFQHFK
LGLHFEALLFWLSLMRDSLPKPMAAAYLSGEGSSTGGMISSSQVDGEKKKTLSLINDDIS
SALLDVSFQRMLKKEKLPPGITLSLGPLELWSDEFEGKGEFGAYRSKLLDLIKLTAFHKP
LIASTKISERVITLIKHLLASPAPLQDVAVMESQQLALYCIVSTIFDGSNEFAGGCSEVH
HALRGVYEGLLQQLLSLKRNEPELMKVHVHYLDAMGPFLKYFPDAVGSVINKLFELLTSL
PHIVKDPATSTSRAARLQICTSFIRIAKAAEKSVLPHMKGIADTMGYLAKEGTLLRGEHN
ILGEAFLIMASSAGVSQQQEVLAWLLEPLSQQWIQPEWQNNYLSDPMGLVRLCSNTSLMW
SIFHTVTFFEKALKRSGYRKSNLNKTSVTTPASHPMAHHLSWMLPPLLKLLRVLHSLWSP
SVIQILPPELKAAMTMTDAERCSLLGEANSKLSKGESVYADGSFDGTKEGKAEASESDIR
NWLKGIRESGYNVLGLSTTIGETFFKCLDANYVAMALMENLQSMEFRHIRLFIHTYISYI
VKSCPADMWDSWLRVLLHPLFIHCQQALSSSWLGLLHEGRAKVPDLFDIQSGSDMKLEVM
EEKLLRDLTREIATLFSTMASRGLNTGVPVLENSGHIGRVDMSTLTDFQAFKSNSMVGFL
LNHKSLALPALQICLEAFTWTDGEATTKVCCFCGVVVLLAILTTNVELREFVSKDLFTAV
IRGLGMESNAIISPDLVNICREIFIYLSDRDPAPRQVLLSLPCLSPNELHTFEEAAAKTS
SLKEQKQLMRSLLLLGTGNNLKALAAQKNLISTNVTARSRLPASAPETVGASFL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggacgatatcagctcaacggcgagtaatgtcgcccgagcgattctcgccgtcctcgat
tatagctccacgtccgacactcgcaaatcggccgtcgaattcctggaatctataaaatct
ggagatgtcagggttttggcaaatatttcgtttcattttgtgaaaaaggagtggtctcca
gagattcgtctgcatgcttttaagatgctacagcatctggtcagactacgatgggacgag
ttaagtcctccggagtgcacagatcttgttaatgtttctgttgaacttatgtcagaggtt
gcaaatgcatgcgagaattggcctcttaagagtcagtcagctgctcttgtagcggagatt
gttagaagacaagcacctgatctttggcaagaaatatttactttattgacttccttgtct
gctcagggccccttacaagctgaattggtcttgatgacgctgagatggcttcctgaagat
attacaattcacaatgacgacttggaaggtgacagacgtaggctattgttgcggggactt
actcaatctttgcctgagattttgcctttattgtataatcttcttgagagacactttgga
gctgcgatatgtgaagctcgtaggaaacacgttgacctggcaaaacagcatgcggatgtg
gttatagcttgcttgaatgccatcatggcatatgctgattgggctccagttccagatctc
gccagatatggaattcttagtgggtgcaacttcttactttcttcccctgacttccgtctt
cacgcttgtgaggttttcaaactcgtctgctctagaaaaagacccagtgatgcttctaca
gcagagtttgattctgcaattagcaatttgtttcagatcctgacgaacgtctccagagaa
ttcttatgtagatcctcctcaagttcaagcgttatagatgaaaatgattatgtttttgca
gaatgcatatgtgagagtatggcctctttaggctcaactaacttgcaatgcatctcctct
gatggtggtgttatggctgtttatcttcagcagatgcttggatttttccaacacttcaag
ttgggccttcactttgaggcacttctcttttggctgtcattgatgcgggattcacttcca
aaacccatggctgcagcttatctaagtggtgagggatcatcaactggcggtatgattagt
tcaagccaggttgatggtgaaaagaaaaagactttaagtcttattaatgatgatatctct
agcgctctactggatgtatctttccagcggatgctcaagaaagaaaaacttcctcctgga
attactctttcgcttgggccccttgaactctggagtgatgaatttgaagggaagggagaa
tttggcgcgtaccgatcaaagcttctagacttgatcaagcttactgcttttcacaagcct
ctcattgctagtaccaaaatatctgaaagagtgattacactcattaagcacctactggct
tctccagcacctcttcaggatgtagctgtgatggaaagccagcaattggcactttattgt
attgtgtcaacgatttttgatggatcaaatgagtttgcggggggatgttctgaagttcat
catgcattgcgtggagtatatgagggattgcttcagcagcttctctccttaaaaaggaat
gaaccagagcttatgaaagtgcacgtgcactatctggatgcaatgggtccttttcttaag
tattttccggatgcagttggaagtgtcatcaataaattatttgagcttctcacctctctt
ccacacattgtgaaggatccagctactagtacatctagagctgcaagattgcagatttgt
acatctttcattagaatagccaaagctgcagaaaaaagtgttctgcctcacatgaagggt
attgctgatacaatggggtatttggcaaaagaaggaactttactccgtggggaacataac
attctaggtgaagcatttcttattatggcttcctcagcaggagtttcacaacagcaagaa
gttctcgcttggttattggaaccattgagtcaacagtggatccaaccagagtggcagaac
aattatctatcagacccaatgggtcttgttcgtttatgctccaacacatcattgatgtgg
tctatattccacactgttacattctttgagaaagcactcaagagaagtggatacaggaaa
agcaatttgaacaagacctctgtgacaactccagcttcacatcctatggcacatcatctt
tcttggatgttgccacccctcttaaaactactccgtgtgcttcattccctttggtctccc
tctgtaattcaaatattacccccagaacttaaggcagcaatgacaatgactgatgcagaa
cgatgcagtctcctgggtgaagcaaattctaaattgtcaaaaggcgaatctgtttatgct
gatgggtcttttgatggaactaaagaaggaaaagccgaggcaagtgaatctgatataaga
aactggttgaaaggtatccgagagagtggatacaacgtgctgggcctatcaacaaccatc
ggagagacattctttaaatgcttagatgctaactatgttgcgatggcactcatggaaaat
ttgcagtcaatggaattcaggcacattcggctgtttattcatacctatataagttatata
gtcaaatcttgtcccgcggatatgtgggattcatggctcagagtgctcctgcacccactg
tttattcactgtcagcaagctctcagctcatcttggctgggtcttctgcacgagggcaga
gcaaaggttccggacttgtttgatatacaaagtggatcagacatgaaacttgaagtgatg
gaagaaaaactattaagagatttaactcgggaaattgcgactctcttttcaacaatggct
tctcgtggactaaacacaggagttccggttttggaaaattcaggccatattggtcgtgtg
gatatgtctactctcacagattttcaagctttcaaatccaactctatggtaggtttcctc
ctgaatcacaaaagcttagctctaccagcactgcagatctgtttagaagcctttacctgg
acagatggagaagcgaccaccaaagtctgttgtttttgtggtgttgttgttcttctagct
atactaacaactaacgtggagctacgagaatttgtttcaaaagatttgttcactgcagtc
atccgcggcttaggcatggagtctaatgccattatcagccctgatttagttaatatatgc
cgtgaaatatttatctacctctctgacagagacccagctcctcgccaggttttgctttcg
ctcccttgtctctctccaaacgagttgcatacttttgaagaagctgcagccaaaacgtcc
agtctcaaagaacaaaagcagcttatgaggagcttgttgttgttaggtactgggaataac
ttaaaagcacttgctgctcaaaaaaatctgattagcacaaatgtcacagcaagatcgcgt
ctaccagcaagcgctccagaaacagttggagcgagttttttgtga
DBGET
integrated database retrieval system
