Capsella rubella (pink shepherd's-purse): 17892417
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Entry
17892417 CDS
T02984
Name
(RefSeq) retinoblastoma-related protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17892417
Transcription factors [BR:
crb03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
17892417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
17892417
NCBI-ProteinID:
XP_023642241
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MEEVQPPVTPPIDPNGKRSEASLLDICEKVLSLDGSTCDEALKLFTETKRILSANMSNIG
SGTREEVERFWFAFILYSVKRLSVRKEGDDQLVSGDNGFNLCQILRALKLNIVDFFRELP
QFVVKAGSVLGELYGADWENRLQAKELQANFVHLSLLSKYYKRGYREFFLTYDANAEKNS
ANSSSYLPDSYRFGWLLFLALRNHAFSRFKDLVTCSNGLVSILAILIIHVPCRFRNFSIQ
DSSRFVKKGDKGVDLVASLCKIYDAAEDELRIVIDKANNLVETILKKKPSPASECRTDKL
DNINPDGLTYFEDLLEETSISTSLITLEKDYDDAVCSKGELDERVFINEEDSLLGSGSLS
AGAVNITGVKRKIDALGSPARTFISPLSPHKSPAAKTNGISGANKLTATPVSTAMTTAKW
LRAVICPLLPKPSPGLEHFLKSCDRDITNDVTRRAHIILEAIFPNSSLGAQCGGGSLQGV
DLMDDIWAEQRRLEALKLYYRVLEAMCKAEAQILHANNLNSLLTNERFHRCMLACSAELV
LATHKTITMLFPAVLERTGITAFDLCKVIESFIRHEDSLPRELRRHLNSLEERLLESMVW
EKGSSMYNSLIVARPALALEINQLGLLAEPMPSLDAIAALINFSEGVHHASTIQNHETCP
GQNGGIRSPKRLCTDYRSILVERNSFTSPVKDRLLALGNVKSKMLPPPLQSAFASPTRPN
PGGGGETCAETGINIFFTKINKLAAVRINGMVERLQLSQQIRESVYCLFQHVLAQRTSLL
FNRHIDQIILCCFYGVAKISQMTLTFREIIYNYRKQPQCKPLVFRSVYVDSLQCRRQGRI
GPDHVDIITFYNEIFIPAVKPLLVELGPVRNDRAVEANNKPEGQCPGSPKVSVFPSVPDM
SPKKVSAVHNVYVSPLRGSKMDALISHSSKSYYACVGESTHAYQSPSKDLSAINNRLNNS
SSNRKRTLNFDVEAGLVSDSMVANSLYLQNQNQNQNHNQIQNGSDASSSGAAPLKTEPTD
S
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttcaacctccagtgactccgcccattgaccctaatgggaaaagaagcgaa
gcgtctctattggacatttgcgagaaagttctatctcttgatgggagcacttgtgacgaa
gctttgaagttgtttacagaaaccaaacgaattttgtcagcaaacatgtctaacattgga
agtggaacgcgggaggaagtagagaggttctggtttgcgtttattctctattctgtgaag
aggcttagtgtgagaaaagaaggggatgatcagttagtgtctggtgataatgggtttaat
ctatgtcagatactgagggctctgaagctaaatattgtggacttttttagagagctacct
cagtttgtggtcaaggctggatctgtattaggtgaactttatggcgcagactgggagaac
agacttcaggcaaaggagttgcaggcaaattttgtgcatcttagccttctaagcaaatac
tacaaacgtgggtaccgggaattcttcttgacatatgatgcaaacgcagaaaagaactca
gcaaactcttctagctatctgccagatagttatcgttttggatggttactctttttggca
ctccgaaaccatgcatttagtcgatttaaggacctcgtgacatgctcaaatggcctagtt
tctatattggctattttgatcatacatgttccttgtcgatttagaaatttcagtatccaa
gattcttctcgctttgttaagaaaggcgacaaaggtgtagacttggttgcatcactttgc
aagatatatgacgccgcagaggatgagttgagaatagtaattgacaaggcaaataatttg
gtagaaacaatattgaagaaaaaaccatctccagcatccgaatgccgaactgacaagcta
gataatattaacccagatggtttgacatactttgaggatttactggaggagacgtccatc
tcaactagcttgattacactagaaaaggattacgatgatgcagtttgtagtaaaggcgaa
cttgatgagagggtatttatcaacgaagaggatagcttacttggatctggaagtttatcc
gcaggagctgtaaatattactggtgtcaagaggaaaattgatgctttgggctcacctgca
aggacatttataagtccactttctcctcataagtcacctgctgcgaagacaaatggtatc
agcggtgctaacaagttgacagcaacaccagtgagcaccgcaatgacaactgccaagtgg
ctcagggctgtcatatgcccgcttctgccaaaaccttctcctggattggaacattttctt
aaatcatgtgatagggatataacaaatgatgtcacacgaagagcacacataatattggaa
gctatttttccaaatagttcccttggtgcccaatgtggaggtggaagtttgcaaggtgtt
gacttgatggatgacatatgggcagagcagcggagattagaagctctcaagttatactac
agagttcttgaggcaatgtgtaaagcagaagctcagattttgcatgcaaataatctgaac
tcgttattgacaaatgagaggttccatagatgcatgcttgcttgctcagctgaattggta
ctggctacccacaaaaccataacaatgttgtttccagctgttctcgagaggactgggatc
acagcctttgatctctgtaaggtaatagagagtttcatccgacatgaggattctctgcct
agagagttgagacggcatctgaattcactggaggaacggcttctagagagtatggtatgg
gagaaaggatcgtcaatgtacaattctctgattgttgcaaggccagcgcttgcattggag
ataaatcagctcggattactagctgaaccgatgccatccctggatgcaattgcagcactt
attaacttctctgaaggggtacatcatgcatcaactattcaaaaccatgaaacttgtcca
ggacaaaatggggggattagatctcccaaaagattatgtactgattaccgcagcatccta
gttgaacgcaactcctttacgtcaccagtaaaagatcgtctgttggccttaggcaacgtg
aaatccaagatgctgccacctccattgcagtctgcatttgccagcccaacacgtcccaac
ccaggaggcggaggagaaacttgtgcagaaactgggatcaatattttcttcacaaagatt
aataaattggctgctgtcagaatcaatggaatggtggaaaggctacagctttcgcagcaa
attagggagagtgtatattgtctcttccaacatgtacttgctcagcggacttctctttta
ttcaatcgacacattgaccagatcattctctgttgcttctacggggtggccaagatatcc
caaatgaccctgacttttagggaaatcatatacaactaccggaaacaaccacagtgtaaa
ccattagttttccgcagcgtttatgtggattcgttacaatgtcgccgtcaagggagaata
gggccagatcatgttgacatcatcacattctacaatgaaatatttattccagccgtaaag
ccgttgctggtggagctaggtcctgtgagaaacgaccgggcagtggaagccaataataag
cctgaaggtcaatgtcctggatcgccaaaggtgtctgtgtttccaagtgttccagacatg
tcccctaaaaaagtatctgcagtgcacaatgtttatgtttctcctcttcggggatcaaag
atggatgctcttatatcacacagctcgaagagttactatgcttgtgttggagagagtaca
catgcctaccagagcccttcgaaggacctatctgccatcaacaatcgcttgaacaacagc
agcagcaaccgcaagaggacgcttaactttgacgtagaagcagggttggtcagcgattcc
atggtagcaaatagcctttacctccaaaaccaaaatcaaaatcaaaatcacaatcaaatc
caaaatggaagcgacgcatcgtcctcaggtgcagcaccccttaaaaccgagccaacagat
tcatag
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