Capsella rubella (pink shepherd's-purse): 17892494
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Entry
17892494 CDS
T02984
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
17892494
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crb01002
]
17892494
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17892494
Enzymes [BR:
crb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
17892494
Peptidases and inhibitors [BR:
crb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
17892494
Ubiquitin system [BR:
crb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
17892494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA
ubiquitin
SASP
Motif
Other DBs
NCBI-GeneID:
17892494
NCBI-ProteinID:
XP_006299059
UniProt:
R0G8K7
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MTMMTPPPLDQQEDEEMLVPNPDLVEGPQPMEVAQTEPAVSTVENPPAEDPPSLKFTWTI
PIFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQFS
LAVVNQLNSRFNIRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLIEAEVAV
RKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTAS
IPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEG
DNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
ENGKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTKEEV
KRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRDSDKDKIICNVDEKDIAEH
LRVRLKKEQEEKEDKRKYKAQAHLYTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRIQ
KQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASNK
ANNAELKLFLEIERGPDDLPIPPPEKSSEDILLFFKLYDPENAVLRYVGRLMVKSSSKPM
DIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICYQKPFPI
QETECRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFILELSKLHTYDDVVERVAEKLGLD
DPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHSAIKDEVVIHNIRLPKQSTVGDVINELKTKVELSHKDAELRLLEVFFHKIYKI
FPSTERIENINDQYWTLRAEEIPDEEKNIGPNDRLIHVYHFTKEPGQNQQVQNFGEPFFL
VIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLQDSDVVYNRFQRRDVYGA
WEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactccgccgccgcttgatcagcaggaagatgaggagatgcttgttccg
aatccggatttggtcgagggacctcagcctatggaagttgcccaaactgagcctgctgtt
tccactgtggagaatccgccagcggaggatcctccaagtctgaaattcacgtggaccatc
ccaattttcaccaggctcaataccaggaagcattactctgatgtatttgttgttggaggt
tataaatggcgtatattgatttttcccaaaggaaacaatgttgaccatttgtccatgtac
ttggatgttgctgatgcagcgaatctgccgtacgggtggagcagatattcacaattcagt
ctggctgtcgtgaatcaactcaacagcagatttaacatcagaaaggagacgcagcatcaa
ttcaacgcaagggaaagcgattggggttttacatcattcatgcctctcagcgagctctat
gatccaagtcgaggatatttagtgaatgacactgttttgattgaagctgaagttgctgtg
cgtaaagttcttgattactggtcatatgactcaaaaaaagagaccggttttgttggactt
aaaaaccaaggtgctacatgttacatgaattctctcctgcagacgttataccacatacct
tacttcagaaaggctgtgtatcacatgccaacgactgaaaatgatgcaccgactgccagt
atcccattggcgctccagagtttgttttacaagcttcagtataatgacaccagtgtagcg
acaaaggagctgacaaagtcatttggttgggatacatatgattcttttatgcaacatgat
gtccaagaactcaaccgagttctctgtgaaaagcttgaggacaaaatgaagggaactgtt
gtggagggaacaatacaaaagctatttgagggtcaccacatgaattacattgagtgcatt
aatgtagactacaaatctactcgaaaagaatcattctatgacctccagcttgatgttaaa
ggatgcaaagatgtatacgcttcttttgacaagtatgttgaagttgaacgccttgaagga
gacaacaaataccatgcagaaggacatgatttgcaggatgcaaaaaaaggtgttctattc
atagactttccaccagttcttcaacttcagctcaagaggtttgaatacgattttatgcgg
gacacaatggtgaagattaatgatcggtatgagtttcctcttcaactggatctcgataga
gagaatggaaaatatttatccccggatgcagacaagagtgttcgcaatctctacaccctc
cacagtgtcttagttcacagtggaggagtgcatggagggcactattatgcatttattagg
ccaacactttcagaacagtggtataaatttgatgatgaacgagtaacaaaggaggaagtg
aaaagggcactagaagaacaatatggtggtgaagaagagttaccgcagaataatcctggt
ttcaataatccacctttcaaattcacaaaatactcgaatgcgtacatgcttgtttatatt
cgggatagtgacaaggataaaataatctgcaacgttgatgaaaaggacattgccgaacat
ttgcgggtgaggctgaaaaaagaacaagaagaaaaggaagataaaagaaaatacaaggct
caagcacacctttacacgacaatcaaggttgcaagagatgatgacatcactgagcaaatt
ggaaagaatatatattttgatcttgttgaccatgaaaaagttcggagttttcgaatccaa
aagcagaccccctttcaacagtttaaggaagaagtagccaaagaatttggtgtcccggtt
caactacagcggttctggatctgggcaaagcgtcaaaaccatacttatcgtcccaatcgt
cccctatcaccaaatgaagaattacagacggttggacaaataagagaggcatctaacaag
gcaaacaatgctgaacttaagctgtttctggaaatagagcgaggaccggatgaccttcct
attcctccccccgaaaagtcttctgaagatattcttcttttctttaagctctatgaccct
gagaatgcagtactaagatatgtgggcaggctcatggtgaaaagttccagtaagcctatg
gatatagtaggtcaactgaataaaatggctggctttgctcctgatgaggaaatagaactt
tttgaggaaattaagtttgaaccttgtgtaatgtgcgaacatctggataagaagacttct
ttcaggctgtgtcaaattgaagatggagatattatttgctatcagaaaccttttcctatc
caggagactgaatgtcgatacccagatgtgccatcatttttggagtatgtacagaatcga
gagctggtgcgttttcgtacactggaaaaaccaaaagaagacgagtttattctggagttg
tcaaagctgcacacttatgacgacgtcgtggaaagagtagctgagaagcttggccttgat
gatccatcgaaactaaggcttacttctcacaattgctactcgcagcaacccaagcctcag
ccaatcaaataccgtggagtagatcatctttcagatatgttagttcactataatcagacg
tctgacattttatattatgaagttctggacattcctcttccagaattgcaaggtcttaag
accctaaaagttgctttccatagcgccataaaggatgaagtggtaattcacaatatcaga
ctacctaagcagagtactgttggagatgttattaacgaactcaaaacaaaggtggaactt
tcacataaagatgcagaactgaggttacttgaggtctttttccacaagatctacaagatc
tttccatctactgaaagaattgaaaacatcaatgatcagtactggactttacgagcagag
gagatacctgatgaagagaagaacattggtcccaatgatcggttaatccatgtatatcat
tttactaaagaacccggacaaaatcagcaagtacagaatttcggcgagcccttctttttg
gtaatccatgaaggtgaaactttagaagaaatcaagacccgtatccaaaagaaacttcat
gtccctgatgaggactttgctaagtggaagtttgcatctttttcaatgggacgacccgat
tacttgcaggactcagatgtagtttataatcgctttcagagaagagatgtgtatggtgcg
tgggagcagtatcttgggttggagcacattgataatgctcctaaaagggcttatgccgca
aatcagaaccgacacgcttatgagaagccggtgaaaatatacaattaa
DBGET
integrated database retrieval system
