Capsella rubella (pink shepherd's-purse): 17892515
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Entry
17892515 CDS
T02984
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00061
Fatty acid biosynthesis
crb00071
Fatty acid degradation
crb01100
Metabolic pathways
crb01212
Fatty acid metabolism
crb04146
Peroxisome
Module
crb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
17892515
00071 Fatty acid degradation
17892515
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
17892515
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
crb01004
]
17892515
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17892515
Enzymes [BR:
crb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
17892515
Lipid biosynthesis proteins [BR:
crb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
17892515
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of breast milk
17892515
Exosomal proteins of breast cancer cells
17892515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
17892515
NCBI-ProteinID:
XP_023642229
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MDSSSSAAARRRINAIHSHLVTSSRSSPLLRSNPTAGEFCLDNGYSVVLPEKLNTGNWNV
YRSAKSPFKLVSRFPDHPDIATLHDNFEHAVHDFRDYKYLGTRVRVDGTVGDYKWMTYGE
AGTARTALGSGLIHHGIPMGSSVGIYFINRPEWLIVDHACSSYSYVSVPLYDTLGPDAVK
FIVNHATVQAIFCVAETLNSLLSCLSEMPSVRLVVVVGGLNESLPSLPASAGVKVVSYSV
LLNQGRSNPQRFFPPKPDDVATICYTSGTTGTPKGVVLTHANLISNVAGSSFSVKFFSSD
VYISYLPLAHIYERANQILTVYFGVAVGFYQGDNMKLLDDLAALRPTIFSSVPRLYNRIY
AGIINAVKTSGGLKERLFNAAYNAKKQALLNGKSASPIWDRLVFNKIKDRLGGRVRFMTS
GASPLSPEVMEFLKICFGGRVTEGYGMTETSCVITGMDEGDNLTGHVGSPNPACEVKLVD
VPEMNYTSGDQPHPRGEICVRGPIIFRGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRL
KIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVGQCFIYGDSFNSSLVAVVSVDPDVLKS
WAASEGIKYGGDLRELCNNPRVKAAVLSDMDTVGREAQLRGFEFAKAVTLVLEPFTLENG
LLTPTFKIKRPQAKEYFGEAITNMYKELGASDPTANKAL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcctcatccgccgcagcacgccgccgcatcaacgctatccactctcatctc
gtcacgtcttctcgttcttcccctctcctccgttccaatcccaccgccggcgagttctgt
cttgataacggctacagtgttgttctccccgagaaattgaatactggcaattggaatgtc
tacagatctgcaaagtctccgttcaagctcgttagtagattcccagatcatcctgacatc
gccactcttcatgacaacttcgagcatgctgttcatgattttcgggattacaagtattta
ggaactcgtgttcgtgtcgacggcactgttggagactacaaatggatgacatacggagaa
gctggtactgcaagaactgctcttggttctggtttgattcatcacggtatcccaatggga
tcatctgttggaatctactttatcaaccgcccagagtggctcatcgttgatcatgcttgt
tcttcttattcttatgtctctgttcctttgtatgatactcttggtcctgatgctgtcaaa
tttattgtcaatcatgcaactgtgcaagccatattttgtgtggcagagactttaaactct
ttacttagctgcttgtctgaaatgccaagtgtacgactggtggtggttgttggagggtta
aatgaatctttaccctcgcttccggcatcagcaggagtgaaggttgtatcatattcggtg
ttactgaatcagggtcgcagtaaccctcagcgatttttcccaccgaaaccagatgatgtt
gcaactatatgctatacaagcggaacaactgggacacccaagggagtcgttttaactcat
gcaaacttgatttcaaatgttgctggctccagctttagtgtgaaatttttctcttcagat
gtttacatttcgtatcttccattggcacacatttacgaacgagctaatcagatcctaaca
gtgtactttggagttgctgttggattctaccaaggggacaatatgaaactactggatgat
ttggctgctctgagacctactatattcagcagtgtccctcgattatacaatagaatttat
gctggtatcattaatgcagtaaaaacctctggggggctgaaagagagacttttcaatgct
gcctataatgcaaagaagcaggctctcttaaatggaaagagtgcttcgcccatatgggac
agattggtatttaataagataaaggacagacttggaggacgggttcgttttatgacgtct
ggtgcttcacccctgtctcctgaagtgatggaatttttgaaaatatgctttggaggaaga
gttacagagggttatggaatgactgaaacatcctgtgttataactggaatggacgagggt
gataacctcactggacatgttggctctcctaatccagcttgtgaagtaaagcttgtggat
gtcccggaaatgaactatacatcaggggatcagccccatccccgtggcgaaatatgtgtt
aggggtcctatcatttttagaggctattacaaagatgaagttcaaacgagagaggtcatt
gatgaagatggatggcttcacactggagatataggtctatggctgccaggaggacgtcta
aaaattattgacaggaagaagaacatcttcaagttggcgcagggggagtatatagctcct
gagaaaattgaaaacgtctatgctaaatgcaaatttgtgggccaatgcttcatatatggt
gatagctttaattcatcattggtcgctgttgtatcggttgatcctgatgtgctgaaaagc
tgggctgcttcggaaggcattaagtatggaggagatctgagagaattgtgcaataacccg
agggtgaaagcagcagtactatctgacatggacactgttggaagagaagctcagttgaga
ggttttgagtttgcaaaggcagtgacgttggtgctagagccgtttacactggaaaatggt
ttgttaactccaacattcaagataaagagaccacaagcaaaggaatatttcggagaagca
ataacaaacatgtacaaggagcttggtgcttctgatcccaccgctaataaagctttgtga
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