Capsella rubella (pink shepherd's-purse): 17892622
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Entry
17892622 CDS
T02984
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17892622
Enzymes [BR:
crb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
17892622
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
17892622
Prokaryotic type
17892622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
DUF674
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
17892622
NCBI-ProteinID:
XP_023641429
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MKLNRTVLSCLRLPSLLKPYSSFHWTTTMATTDKTIEGMKTVDEADVGISCFISQLPGFR
GILKQRYADFIVNEVDINGNVVHLTSLDLPPEMDVKEEDKTKSSDNVPQNYTSAIESFKS
ISNATDAERLETLINQVTSGTDDEISPVVLDPSSDKSKRTAIHNFVKENFKFLVTDTVDG
PDSTSKCIRVRVNSGAHNNRGNRSKKRKERGDKPFDSRGSEHWPEHVGKFLRFHLYKENK
DTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQCVTVFKQQASKLAALNKRLFGIKVGD
FCHVKEGLLLGQLMGNRFTITLRGVVADSEETIKKSAESLGKDGFINYFGLQRFGSGSVP
THHVGAALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLPRYLVAERA
ILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKKYGTSQVVLGDLVST
KIDATKKMADTSEHKENNEDALDCDQVDDTAIVDLPAERSDLVKVVSVEDLEAGTYSTSD
IVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTDSIHGVKEFSITSMTGGYRRVFQKPID
FEWELLTYTDSNKPLAETDLDRITMTVDKVGSAEEVEDESMNPISNPPETDLNDQTERKD
DEKDTGNPNSEQTQMALKMALTLPSSCYATMAIRELLKTSTSVAYHKTLN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaatagaactgtcttgtcttgtttgcgtttgccgtctctgcttaaaccctac
tcgagctttcactggacaacgacaatggcgacgacagataaaactatcgaaggtatgaaa
acagtagatgaagctgacgtgggcatctcctgtttcatctcccagctccctggcttccgc
gggatcctcaaacaaagatacgcagactttattgttaatgaagtggatatcaatggcaat
gtggttcatttgacatccttggacttgcctcctgagatggatgtgaaggaggaagataaa
accaaaagttctgataatgtaccccaaaattatacttctgcaattgagtcattcaaatca
atttccaatgccactgacgcagagcgtttggaaacattgatcaatcaagtaacctcagga
actgatgatgaaatctcaccagttgttcttgatccaagttctgacaaatccaagagaacg
gctatccacaactttgttaaagagaatttcaagttccttgtgactgacactgttgatggt
cctgattctacttcaaaatgcatccgtgtgcgagtgaattcaggagcccataacaacaga
ggtaatagatcaaagaaacggaaggaaagaggcgataaaccttttgatagcagaggttca
gagcattggccagagcatgttggcaaatttctcaggttccatctttacaaggagaacaaa
gatacacaagaggctttaggattgattggaaagatgctaggcgttcagccaaaatccttt
ggattctctggaacaaaagataagcgctctgtttcaactcagtgtgtaactgtgttcaaa
caacaagctagtaaattggctgcgctgaacaagagattgtttgggatcaaagttggcgac
ttctgccatgtcaaagagggccttctccttggacagctcatgggaaacagatttaccatc
acgttaagaggagtggttgctgattctgaagaaactataaaaaaatctgcagagtccttg
gggaaagatggatttatcaactattttggcctgcagcgttttggaagtggttcagtacca
acgcaccatgttggagctgcactattgaaaggagagtggaaagatgccgtagacatgatt
cttgatccaagagaaactgaaaggcatgtagtaaatgatgcccgggaatattacaaagaa
actggcgacattgatgggactttaaggcaattaccgcgatacctcgttgctgaaagagcc
atactgcagtgtctgaagaaatgtcctggtaactacttgcaggctctgaaaggcattccc
agaactttgagaatgatgtatgtacatagttaccaaagctacttatggaacaatgcagca
agtctgcgcgtcaaaaaatatgggaccagccaagttgtgttgggggacttggtaagtaca
aagatagatgctacaaaaaagatggctgatacatctgagcacaaggaaaacaacgaagac
gcattggattgtgaccaggtagatgatactgctattgtagatcttccagctgagaggagt
gaccttgttaaggttgtaagtgtagaggatttggaagctggaacttactcaaccagtgac
atcgtcctccctcttcctggttcaagagtcatttacccgtccaatgacattgcggaaatt
tatcatgatttggcaaagaaggacggtatcagcctaactgacagcattcacggtgtaaag
gaattctcgataactagcatgactggtggttatagacgtgtattccagaaaccaatagac
tttgaatgggagttactcacttacactgacagcaataaaccattggcagaaacagatttg
gacaggataaccatgacagttgataaagttggatctgctgaagaagttgaagatgaatca
atgaatcccatttctaaccctcctgaaaccgatttgaatgaccagacggagagaaaagat
gatgaaaaagacactggaaatccaaattctgagcagacacagatggcgcttaaaatggca
ctcactcttccatcctcttgttatgccacaatggcaatcagagaactgttgaagacgtca
acttctgttgcatatcacaagacacttaactag
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