KEGG   Capsella rubella (pink shepherd's-purse): 17892652
Entry
17892652          CDS       T02984                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    17892652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crb03021]
    17892652
Enzymes [BR:crb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     17892652
Transcription machinery [BR:crb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     17892652
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77 SPK
Other DBs
NCBI-GeneID: 17892652
NCBI-ProteinID: XP_023641577
LinkDB
Position
Unknown
AA seq 1171 aa
MDIDDMDIEEIEAAGQINPSDLGQNFLQSFCKKAATSFFDKYGLISHQLNSYNFFIEHGL
QNVFDSFGEMLVEPSFDPTKKKENGWKYASVKFGQVTLEKPKFFSDDKELEFLPWHARLQ
NMTYSARIKVNVHVEVFTKTVVKSDKFKTGQDEYVEKKDLDVKKQDILIGSIPVMVKSIL
CKTSEKGKENCKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISFTNSPWTVSFRSE
NKRNRFIVRLAENQKLEEYRRREKVLTVYFLSTEIPVWVLFFALGVSSDKEAMDLIAFDG
DDASITNSLIASIHEADAVKEGFRHGNNALAFVEKQIKDTKFPPAESVDDILRLYLFPGL
QSLKKKARFLGYMVKCLLSAYAGKRKCENRDSFRNKRMELAGELLEREIRVHLAHARRNM
TKAMQKHLAGEGVLKPIEHYLDASIITNGLNRAFSTGQWSHPFRKMERVSGVVANLGRAN
PLQTLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVST
QILEPVMEKFLDCGMEELMDDTSTPLCGKQKVLLNGDWVGLCSNPKSFVAELKSVRRQND
LLRQMEIKRDKDDNEVRIFTDAGRLLRPLLVVKNLHKLKQDKPTQYPFEHLLDQGILELI
GIEEEEDCNTAWGIPYLLKEPNNYTHCELDLSFLLGVSCAIVPFANHDHGRRVLYQSQKH
CQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECLKKEVLFNGQNAIVAVNVHLGY
NQEDSIVMNKASLERGMFRSEQIRSYKSEVDSKDSEKRKKMDELVQFGKIHSKIGRVDSL
DDDGFPYIGANLSTGDIVIGRCTESGADHSVKLKHTEKGFVQKVVLSSNDDGKNFAAVSL
RQVRSPCLGDKFSSMHGQKGVLGYIEEQQNFPFTIQGIVPDIVINPHAFPSRQTPGQLLE
AALSKGIACPIQKKEGSSAAYTKVTRHATPFSTPSISEITEQLHRAGFSRWGNERVYNGR
SGEMMRSLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERD
CLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGRKIRGPYCRVCESPDH
VVRVYVPYGAKLLCQELFSMGITLNFDTKLC
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggatattgatgacatggatattgaagagattgaggctgctgggcagatcaatccttct
gacctaggacaaaattttctccagagtttctgcaaaaaagctgcaacatccttctttgac
aagtatggacttataagtcatcagctcaactcctacaacttctttattgaacacgggctt
cagaatgtgtttgattcctttggtgagatgctcgtggaaccatcttttgatccaactaag
aagaaagaaaatggttggaaatacgcatctgtaaaattcggacaagtcacactggagaag
cccaaattcttttcagatgacaaggagcttgagtttctcccatggcatgccaggcttcag
aacatgacatactcggcaaggatcaaagtgaatgtccacgttgaggtgttcacaaaaact
gttgttaaaagtgacaaattcaagactggacaagatgaatatgtcgagaagaaggatcta
gatgtcaaaaagcaggacattctaattggtagtatacctgtcatggtgaaatctatcctt
tgcaaaactagcgagaaaggaaaggaaaactgcaaaaagggggattgtgcctttgatcag
ggtggatattttgttataaagggggctgagaaggtgtttatagctcaagaacagatgtgc
acaaagagactgtggatttccttcaccaattcaccatggacagtctccttcaggtctgaa
aataaaaggaatagattcattgtgcgcctggcggagaatcagaaattagaagagtatagg
agaagggagaaagtactaacagtgtacttcttgtcgactgagattccagtctgggtcctc
ttctttgcgctgggtgtttcatcagataaagaagccatggatctaattgcttttgatgga
gatgatgcaagcattaccaatagtctcatagcttctatccatgaagctgatgcagtcaaa
gaaggttttcgccatgggaataatgctctagcatttgttgaaaagcagattaaagacacc
aaattccctcctgctgaaagtgtggatgacatcctccgcctgtatttgtttccaggcctc
cagagtttgaagaaaaaagcccgattccttggctatatggtgaagtgtcttctgagtgca
tatgctgggaaaagaaaatgtgaaaatagggacagtttcaggaacaagcgaatggaactt
gctggagaactgttggaaagggagataagagtgcatctggcacatgctagaagaaacatg
accaaggccatgcagaaacaccttgcaggcgagggtgttttgaagcctattgagcattat
ttggatgcatccataatcacaaatgggcttaatagagccttctccactggacaatggtct
caccctttcaggaagatggaaagggtttcaggtgttgtagctaacctgggtcgcgcaaat
ccattgcaaactctgattgatctgaggagaacccggcagcaagttctttatactggcaag
gttggagacgccagatatccgcatccctctcactggggcagagtatgctttttgtcaact
ccagatggtgaaaattgtggtcttgtgaagaacatgtctcttctaggacttgttagcact
caaattttggagcctgtgatggaaaagttcttagattgtggaatggaagagctgatggat
gatactagcacaccattgtgtggcaaacagaaagttcttctcaatggagattgggtagga
ttatgttcaaatcctaaatcctttgtggcggagttaaaaagtgtgcggcgccaaaatgat
ttacttcgtcagatggaaatcaagcgagataaagatgacaatgaggtgagaatcttcact
gatgctggtagactactccgacctctcttggttgtgaaaaatctccacaagttgaagcaa
gacaaaccaacacagtatccttttgagcatcttcttgaccaagggatcctcgaactgatt
gggattgaggaagaagaagactgtaatacagcatggggaatcccttatcttctgaaggaa
ccaaataattacacgcattgcgaactggacctctcattcttgttgggtgtgagctgtgca
attgtcccatttgcaaatcacgatcatgggagaagagttctctaccagtcccagaagcat
tgccaacaagccattgggttctcatcaacaaaccctaacattcgctgcgatactctgtcc
cagcaactattctatccccagaagccacttttcaagacattggcgtcggagtgtcttaaa
aaagaagtgctgtttaatggccagaacgcaattgttgctgtgaatgttcatctcgggtac
aaccaagaggattccattgtgatgaacaaggcttcactggaacgtggtatgttccgttca
gagcagattagaagctacaagtcagaggttgatagcaaagactcggagaagaggaagaag
atggatgagcttgttcagtttggaaagatacacagcaaaatcggcagagtagacagcctt
gatgatgacgggttcccttacattggtgctaacttgagtactggcgatattgtcattggc
agatgcaccgagtctggggctgatcacagtgtaaagctcaagcacactgagaaaggattt
gtgcaaaaagtggtattatcatccaatgacgatgggaagaattttgctgcagtttctctg
agacaggttcgttctccatgccttggagataagttttccagtatgcatggccagaagggt
gtgttaggctatatagaggaacagcagaattttcctttcactatccaaggcatagttcct
gatattgtgataaacccgcacgctttcccttctaggcaaacaccgggtcaactcttggag
gctgctctctccaaaggaatagcgtgtcctatacaaaagaaggagggtagctctgcagca
tacaccaaagtgactcgtcatgccactcctttctccactccgagtatctctgaaatcaca
gagcagcttcacagggctggattttcaagatggggaaacgaaagggtctacaacggtaga
tcaggggagatgatgcgatctctgatattcatgggcccaactttctatcagcgacttgtc
cacatgtcagaggacaaagtgaaattcagaaacactggaccagtccacccgctcacacgg
cagccagtggcagacaggaagaggtttggtgggataaagtttggagaaatggagcgagac
tgcctaatagctcacggtgcatctgctaatctgcacgagcgtctcttcaccctcagtgac
tcttctcagatgcacatctgcaggaaatgtaagacctatgcgaatgtgatcgagaggact
ccaagcagtggaagaaagatcagagggccatattgtagagtctgcgaatccccagaccat
gtggtaagggtttatgttccttatggagctaagcttctgtgtcaggagctgttcagcatg
ggaatcactctcaacttcgacaccaagctctgctga

DBGET integrated database retrieval system