Capsella rubella (pink shepherd's-purse): 17892839
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Entry
17892839 CDS
T02984
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
17892839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crb03032
]
17892839
03400 DNA repair and recombination proteins [BR:
crb03400
]
17892839
DNA replication proteins [BR:
crb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
17892839
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
17892839
BRCA1-C complex
17892839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FHA
BRCT
Yop-YscD_cpl
PTCB-BRCT
Na_trans_cytopl
Motif
Other DBs
NCBI-GeneID:
17892839
NCBI-ProteinID:
XP_006299365
UniProt:
R0I738
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MVWGLFPVDPLSGEDKYYIFSKGNYKIGRKGCDIIINKDKGVSRIHAELTFDATAVSTSL
RNKSSDTSSFVIRVKDCSKYGTFIKTDMGKREKVHELPNKEKILRDGDVLTFGTGSATYR
LSLIPLVFYFCPSSETFKVDQSVQDAVSSIGARISSTLSEECTHVLLEPRMQVNEALVNA
VLAKKPIILTNWVKLLAEKSICSEIPGYSQYRPSVIVEETLVDVLELNVREKCLEGYTFV
LEPTETYRFGCSFPSLLELCGAETVTLADISSMSQDSQFGELNRMICVIPKSSGDKFGRL
KNLSLLSRVNEMDLVCAVFSGNLSSTSLIPPSVVISSSCSTDETVVADSDAEEEETTSSV
HMIDTTGKPETPEKPAAIVIEDSPVRILEDTMNLDECRSVNILADTENRAHIDEKNSGGS
VTIPRDRNDEPESGNSEIIYTQDLIVRDLRSTRKIHSTGEEGIVDFKRFRKGNVTCGNSF
TSLIPFAKDPYKEYDSGDVTDFMKEEKKRKQMEAIAEDLFNTEKARKRGTAGSIHGFLTR
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggtctctttcccgtcgatcctctttcaggtgaagataagtactatatcttt
tcaaagggtaattacaagattggtcgaaaaggatgtgatataattatcaataaggataag
ggggtatctaggatccacgcagagttaacctttgatgcaacagctgtttcaacctctctg
aggaacaaatcttctgatacctcctcgtttgttatccgtgtcaaagattgctcaaagtat
gggacttttatcaaaactgacatgggaaaaagagagaaagttcatgagctacctaataag
gagaaaattctcagagatggagatgttttaacgtttggtacaggttcagcaacttacagg
ttgtccttgattccgcttgtattttacttctgcccttcctctgagacctttaaggtggat
cagtcggtacaagatgcagtttcatcaattggtgctcgtatttcttctaccttgagtgag
gagtgcactcatgtgcttcttgagccacgtatgcaagtgaatgaagctctggtcaatgct
gttttagccaaaaaaccaatcattttgaccaattgggtgaagcttctcgcagagaaaagt
atctgcagcgaaattcctggatacagtcagtacagaccatcagtgatagttgaagaaact
ttggtggatgtactagaattaaacgttcgtgaaaaatgtctagaaggatatacctttgtc
ttggaaccaacagaaacgtatagatttggttgcagcttcccatctttacttgaattatgt
ggtgcagagaccgttactttagcagacataagctccatgagtcaggattctcagtttgga
gaacttaatcgcatgatatgtgtcatcccgaaaagttcaggagacaaatttggccgtttg
aagaatctcagtttgttatctagagtgaacgagatggatttagtatgcgcagtcttttcc
ggaaatctatcttcgacttcactgataccaccttccgttgtaatttcatcctcgtgctct
acggatgagacagtggtagcggattctgatgccgaagaggaagaaacgacatcgtctgtt
catatgattgatactaccggaaagccagaaacaccagagaagcctgctgctattgtaata
gaggatagtccggttaggatattggaagacacaatgaatttggatgagtgtagaagcgta
aacatattagcagatactgaaaatagagcccacatcgacgaaaagaactcaggtggtagt
gtgacaatcccaagggatcggaacgatgagcctgaatctgggaactcggagattatatac
actcaagatcttattgttagggacttgcgatcaactagaaaaattcattctacaggagag
gaaggaattgtggacttcaagcgattcagaaagggaaatgttacatgcggaaacagcttc
actagcctaataccttttgcgaaggatccatacaaagaatacgacagcggggacgtgaca
gattttatgaaagaagagaagaaaagaaagcagatggaagccattgcagaggacttgttt
aatactgaaaaggctagaaagcgtggaacggctggttccattcacgggtttctcactcga
ggttga
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