Capsella rubella (pink shepherd's-purse): 17892865
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Entry
17892865 CDS
T02984
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17892865
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17892865
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
17892865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-Nse
zf-RING_16
zf-C3HC4_3
Prok-RING_1
Caulimovir_coat_dom
RINGv
zinc_ribbon_16
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
17892865
NCBI-ProteinID:
XP_006297819
UniProt:
R0G598
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MAGSDDHHRNPYMAFPGVFPIVFLLVLSSADLAASQSQPGPTNQPYNYGRLSPAMAVIVV
ILIAALFFMGFFSIYFRHCSGVPDAGVSPAGAARSRGTVNAAARGLDAAVVETFPTFLYS
DVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLEAHVTCPVCRANLA
EQVAEGESVEPGGTEPDLELQQVAPNPEPVLTAPVPEELATSEIDSRRLPGVPVDLKRVN
KFSRSHTTGHSVVQPGECTERFTLRLPEDVRKRIMRDWKLNRSNSVLVLPRGGSSRRGKP
IDRSRARSDRWLFRKTPSFLWRSRDDGSIRLGSTGSVRANPVPNPTGGDSVRGGERWAFL
RNASFLWRNSSVHVQRGGVNKDGEGTSVNPTGPSGSRSGSVRLPV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctccgatgatcatcataggaatccatatatggcttttcccggcgtttttccg
attgttttcttgcttgtattatcatcggcggatctagcggcgagtcagtcgcagcccggt
ccaactaatcaaccttacaactacggcagactaagtccagccatggctgtgatcgttgtc
atccttatcgctgctctctttttcatgggcttcttctccatctacttccgccactgttcc
ggcgtacctgacgccggcgtttctcccgctggagctgctagatccagaggaaccgtcaac
gcggcggcgcgtggtctcgacgctgcagttgtcgagactttccctacgttcttgtactcg
gacgttaagacgcagaagcttggtaaaggtgagctggagtgcgcgatttgtctgaacgag
ttcgaagacgatgaaacgctgcgtttgcttcccaagtgtgatcacgtgtttcaccctcac
tgcatcggtgcttggctcgaggctcatgtcacttgtcctgtttgtagagccaatcttgct
gaacaggtcgctgaaggcgaatcggttgaaccgggaggaactgagccggatcttgaactg
cagcaagtggcgccgaatcctgaaccggtacttaccgctccggtaccggaagaattggcg
acgagtgaaatcgattcgaggagattacctggtgtaccggtggatctcaagcgggttaat
aagttctcgagatcgcatacaacgggacattcagtggttcaaccgggagaatgtaccgag
cggtttactctccggttaccggaagatgttaggaagaggataatgagggattggaaattg
aaccggtcgaatagtgtcctggttctacctaggggagggagttcaaggagaggaaaaccg
attgatcggtcgagagctcggtctgaccggtggttgttccggaaaacgccgtcgtttcta
tggaggagtcgtgatgatggttcaataaggctaggtagtaccggaagcgttcgagccaat
cctgtaccgaacccaaccggtggtgattcggtacgaggaggagaacggtgggcatttctt
agaaacgcgtcgtttctgtggaggaactcttcggtacatgtgcaaagaggaggagtcaat
aaagacggcgaaggaacttcggttaatccaaccggtccaagtggttcaagaagcggttcg
gtgagattaccggtttag
DBGET
integrated database retrieval system
