Capsella rubella (pink shepherd's-purse): 17893017
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Entry
17893017 CDS
T02984
Name
(RefSeq) probable acyl-activating enzyme 16, chloroplastic isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00061
Fatty acid biosynthesis
crb00071
Fatty acid degradation
crb01100
Metabolic pathways
crb01212
Fatty acid metabolism
crb04146
Peroxisome
Module
crb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
17893017
00071 Fatty acid degradation
17893017
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
17893017
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
crb01004
]
17893017
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17893017
Enzymes [BR:
crb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
17893017
Lipid biosynthesis proteins [BR:
crb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
17893017
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of breast milk
17893017
Exosomal proteins of breast cancer cells
17893017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
17893017
NCBI-ProteinID:
XP_006299603
UniProt:
R0GAD7
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MASSTSLGPSILVSHCSSAPEFQVSGMRLVFGYKGFGRRTSRRGFRVRCESTIQEKELRR
CSPFLERSSLPKEVALRSNEWKAVPDIWRSSVEKYGDRVAVVDPYHDPPTTFTYRQLEQE
ILDFVEGLRVVGVKADEKIALFADNSCRWLIADQGIMATGAVNVVRGSRSSVEELLQIYC
HSESVALVVDNPEFYNRIAESFSYKAPPRFVILLWGEKSSLVTVGRQTPVYSYNEIKRFG
QERRAKFARSNDAGKYEYEYINPDDTATIMYTSGTTGNPKGVMLTHQNLLHQVKNLSDFV
PSQAGERFLSMLPSWHAYERACEYFIFTCGVEQKYTSIRFLKDDLKQYQPHYLISVPLVY
ETLYSGIQKQISTSSPVRKFLALTLIKVSLAYTEMRRIHEGLCLTKNQKPPMYIVSLVDW
LWARVVAFFLWPLHMLAENLVHRKIRSSVGITKAGVSGGGSLPMHVDKFFEAIGVNVQNG
YGLTETSPVISARKLSCNVLGSVGHPIKDTEFKIVDPETGSVLPPGSKGIVKVRGPPVMK
GYYKNPLATKQVIDDDGWFNTGDMGWIAPKHSAGRSRSCGGVLVLEGRAKDTIVLSTGEN
VEPLEIEEAAMRSNLIQQIVVIGQDQRRLGAIIIPNKEAAEEAAKQKISPVDPEVNELSK
ETITSMVYEELRKWTSQCSFQVGPVLIVDEPFTIDNGLMTPTMKIRRDKVVDQYKSEIER
LYK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccacgtctcttggaccttcgattctcgtttcccactgctcctctgctcct
gaatttcaagtttctgggatgagattggtgtttggttacaagggttttggtcgtcgaact
tcacgacgggggtttcgagttcgctgcgagtccacgattcaagagaaggagttaaggcgg
tgttcgcctttcttggaacgctcatcattgccaaaggaggttgctttacgctctaatgaa
tggaaggctgttcctgatatttggagatcatctgtggaaaagtatggtgacagagttgcg
gtggtggacccttatcatgacccgccaactacattcacgtacagacagttggaacaagaa
attttggactttgttgagggtttgcgagtggttggagtgaaagcagatgagaagattgca
cttttcgccgataactcttgtcggtggcttattgctgatcaaggtataatggctacagga
gcagtcaatgttgttagaggttccagatcctctgttgaagagttattgcagatatactgt
cattcggaaagtgtagctcttgttgtggataaccctgagttttacaaccgcattgctgag
tcattttcttacaaggcacctccaagatttgtgattcttctatggggtgaaaaatcgtca
ttggttacagtgggtaggcagacaccagtctatagttacaacgaaattaaaagatttgga
caagagagacgcgcaaaatttgcaagatctaatgatgctggaaagtatgaatatgagtac
atcaatccagatgacacagccacaattatgtataccagcggaaccacgggaaatccaaaa
ggtgttatgctcacacatcagaatttgttacaccaggtaaaaaacttatccgactttgtg
ccttctcaagctggggaaagatttctaagtatgctgccatcatggcatgcctatgaacgg
gcttgtgaatacttcatatttacatgtggagtagagcaaaagtatacttctataagattc
ttaaaggatgatctcaagcaatatcaaccacactatctcatttcagttcctttagtgtat
gagacgctctacagcgggattcaaaagcaaatttctacaagctccccggttcgtaaattt
ttggcccttacactgatcaaagtcagccttgcatacacggagatgagaaggattcatgag
ggtctttgtttgacaaaaaatcaaaagcctccaatgtatattgtttcgttggtggattgg
ttgtgggcgagagtagttgcatttttcctatggccattgcatatgttggctgaaaatctt
gtgcacagaaaaattcgttcgtctgttggaataacaaaggctggtgttagtggaggtggt
agtttacctatgcatgttgacaagtttttcgaggccatcggtgtgaatgtacaaaatggg
tatggtttgacagaaacctcaccagttatctctgcgcggaagcttagctgtaatgttctc
ggctcagttgggcatcctattaaagatacagaattcaaaattgtagatcctgagactggt
tccgttcttccacctggttcaaagggcattgtcaaagtccgaggccctccggtgatgaaa
ggttactataagaatccactggccaccaagcaagttatagatgacgatggatggttcaat
actggagatatgggttggattgctcctaagcactcagcaggacggagtcgtagctgtgga
ggtgtcctcgttcttgaaggccgtgccaaggacacaattgtactttccacaggtgaaaat
gtggaaccattggagattgaagaagcagccatgagaagcaatttgattcaacagatagtg
gttattggacaggatcagcgccgccttggagctattattatcccaaacaaagaagcagca
gaagaagcagcaaagcagaaaatttcacctgtagatcctgaagtcaacgagcttagcaag
gagacgataacgagcatggtctacgaagaactgaggaaatggacgtcacaatgctcgttc
caagttggaccggttctgatcgttgatgagcccttcacgatcgacaacggtttaatgaca
ccaacaatgaaaataagacgggacaaggtggttgatcagtacaagagcgaaatagaaaga
ctttacaagtag
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