Capsella rubella (pink shepherd's-purse): 17893206
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Entry
17893206 CDS
T02984
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17893206
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
90S particles
Other 90S particles
17893206
Pre-60S particles
Other pre-60S particles
17893206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_IFT140_2nd
Beta-prop_Vps41
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
17893206
NCBI-ProteinID:
XP_023641953
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MITSLSWIPKGASKAMPYEAQSPSKEDIKELIHNGTFKKSLSDMDMDDEIKNCEVAHAKA
VAKSFGKPCSESKDASSSSSTSADPDNVVNFLKELDMDNYDEEDDEIELFSSGQGDLYYP
SNEMDPYLNNTEDKYDSEDLDDMTIRPTDSLIICATSRDKTNNLEVYVYEDTGNGTHNLY
LRNDIIIPEEPLCTAWLDCPLKGREKGNFVAIGSMETSIEIWDLDLVKEVLPCVRLGRIG
GETSQDSHSEPVIDLAWNKEFRNIVASASADKKVKVWDVATGKCKVTMEHHKNKVHAVAW
NHYAPEVLLSGSRDRTVVLKDGRDPSHSGLKWSTKGKVESLAWDPHSEHSFVASLKDGTV
KGFDIRASHLSPNFTLHAHDNEVSSISYNIHAPNLLATGSEDGSVKIWDLSNNQPSWIAT
HMPDAGKVFSVSFSADCPFLLAIGGSEGNLKVWDTLSDTGVSQRYGSNRP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgataacttcactttcatggataccaaaaggggcatcaaaggccatgccttatgaggct
cagtctccttctaaggaggatatcaaagagctcattcataatggcactttcaagaaaagt
ctcagtgacatggatatggacgatgagataaagaattgtgaagttgctcatgccaaggct
gtagcaaaatcttttggcaaaccatgttccgaaagcaaggatgcttcttcttcttcgtct
acttcagcagatcctgataacgtagtcaacttcttgaaagaactcgacatggataactat
gacgaagaagatgatgaaattgaactgtttagctctggacaaggagacctttattatcca
agcaatgagatggatccatacctaaataataccgaggataagtatgactccgaggatctt
gatgatatgacaattaggccaactgattcactgatcatctgcgctactagtagagataaa
accaacaatcttgaggtctacgtatacgaggacaccgggaatggcactcacaacttgtat
cttcgtaatgacataattatacctgaggaaccactgtgcacggcatggcttgattgtcct
ctcaaaggaagggaaaaagggaactttgtagctattgggtctatggagacctcaatagag
atatgggatcttgatcttgtaaaagaggtgctaccttgtgtacgactcggacgaataggt
ggagagacatcacaagattcccactctgaaccagtgattgatcttgcttggaacaaggag
tttaggaatatagttgctagtgccagtgctgacaaaaaagttaaggtttgggatgtggct
acagggaagtgcaaggtcactatggagcatcataaaaacaaggttcacgcggtcgcatgg
aatcattatgctccagaagtactcctcagtgggtctcgtgatcgcaccgttgtattgaaa
gatggaagggacccttcacactcaggtttgaaatggtctaccaagggcaaagttgaaagc
ttggcctgggatcctcacagtgaacactcctttgtggcaagtctcaaagatggaactgtg
aaaggctttgatatacgtgcttctcatctatcaccaaattttactctccatgctcatgat
aatgaagtctcctccatatcatacaacatacatgcgcccaatcttttggctacaggatct
gaggatggaagtgtgaaaatttgggatctttcaaataatcaaccatcatggattgctaca
cacatgccagatgcgggaaaagtgttctccgtatcattctctgcggactgccccttcttg
ctcgctattggtggctcagaggggaatctaaaagtgtgggatacactgtcggacactggc
gtgtcccaaagatatgggagcaaccgaccatga
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