Capsella rubella (pink shepherd's-purse): 17893253
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Entry
17893253 CDS
T02984
Name
(RefSeq) DNA topoisomerase 6 subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crb03032
]
17893253
Enzymes [BR:
crb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
17893253
DNA replication proteins [BR:
crb03032
]
Prokaryotic type
DNA Topoisomerases
17893253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
RMC1_C
BING4CT
Motif
Other DBs
NCBI-GeneID:
17893253
NCBI-ProteinID:
XP_006297133
UniProt:
R0G3X3
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MAGDDLAETKKGSSKNTKNSNESKLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVEN
ALDSAESISELPEVEVTIEEIVKSKFNSMIGLIDRERVDTQLYDDYETEKAREKRLAKEA
RASEIQAKNLASGKKNKEPGVSKVLKARGEASYYKVTCKDNGKGMPHDDIPNMFGRVLSG
TKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKSQNYVTFCRLDIDIHRNIPHIH
LHEKKGNKEKWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFRFISETPEKNV
TIKFTRRTDVMPPIPVETKHHPSSVDLLLIKRLVTDTSKKTLLQFLQNEFVNINKTLATR
LIGEMGPDFSPSMAVKSVTSQQMVRIHQLFRQAKFDDPSGGCLSPAGEYNLRLGIIKELH
PDMVATYSGSAQVFEGHPFIVEAGVSVGGRDVKQGINIFRFANRIPLLFEQGGDVVTRTA
SKRINWNSYKINQTQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIATAVKSAIQQCCIQ
LKSKIVKRLQAREQQERKRSLSRYIPDATGAVYEVLKQMTEEHKTKRKRYGEEDTAMLDK
VSKEIITKETLTEKLAQHVEQVDYEMALEYATQSGVSEEPRENIYLQHLDSNKTNFIDLH
SPTFVFRLIL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgatgatttagctgaaacgaagaagggaagctcgaagaacactaagaacagc
aacgagagcaaactcaagcaaaaatcaccagctgagtttttcgcggagaacaaaaacatt
gctggatttgacaatccggggaagtcgctttacactacagttagagagcttgttgaaaat
gctcttgattctgcagagtccatttcagagctccctgaggttgaagtaacaatcgaggag
attgtaaaatctaagtttaattccatgattggtcttattgatcgggaacgtgttgacaca
cagctgtatgatgactatgagacagagaaggcccgtgagaaaaggttagcaaaggaagct
cgtgccagtgagatacaagccaaaaacttggcatcgggaaagaaaaacaaagagcctgga
gtctcaaaggttttaaaggcccgaggggaagcatcgtattacaaggtgacatgtaaggat
aatggtaaggggatgccacatgatgacattccaaatatgtttgggagagttttatccggg
acaaagtatggactgaagcaaacacgtgggaagtttggtctgggcgcaaagatggcctta
atttggtccaaaatgagtacaggtctccccatagagatttcttcatctatgaaaagtcaa
aactatgttactttctgtagactggatatcgatattcacaggaacattcctcatattcat
ctccacgaaaagaagggcaacaaagagaaatggcatggggctgaaatacaggtggtaatc
gaaggaaactggacaacgtacagatcaaagatcttgcactatatgcgtcaaatggctgtt
attactccttacgcgcagtttctgtttagatttatatcagagacaccagagaaaaatgtc
actattaagtttactcgaagaactgatgtgatgcctcctattcctgttgagaccaagcac
catccatcttcagttgacttgctgcttatcaagcgccttgttacagacacctccaaaaag
acccttctgcagtttcttcaaaatgaatttgtaaatattaacaaaacccttgcaacaaga
ttaattggggaaatgggacctgatttcagccctagcatggctgtcaaatctgtaacatcg
cagcaaatggtacgcatacatcagttattccgccaagccaaattcgacgaccctagtggt
ggctgtcttagtccggcaggagaatacaatcttcgcctagggattatcaaggagctgcat
ccagatatggtagcaacgtattcaggcagtgctcaggtcttcgaaggtcatcctttcatt
gttgaagctggtgttagtgttggtgggcgagatgtgaaacaggggatcaacatatttcgt
tttgcaaaccgtattccactccttttcgaacaaggaggtgatgttgtcaccaggacggcc
tcaaaaagaatcaattggaatagttataagatcaaccagacgcaagataaaataggagtt
tttgtgagcatagtgagtacaaaaattcctttcaaagggacagggaaagagtacatagga
gatgacatcagtgagatagcaactgcagtcaagtctgcaatacaacaatgctgcatccaa
ctgaaatccaaaatagtcaagagactgcaagcccgtgaacaacaagagcggaaacgcagt
ttgagcagatatatacccgatgcaacgggtgcggtgtacgaggttttaaaacaaatgaca
gaagagcataaaacaaagagaaaacgttacggagaggaagacacagctatgcttgacaaa
gtttctaaagagataatcacaaaagaaacattgacagaaaagcttgctcagcatgtagaa
caggtagactacgagatggcattagagtatgcaacacaaagtggagtaagtgaagaaccg
agagaaaacatatacctccaacacttggattccaacaagaccaatttcattgatctccat
agtccaactttcgtcttcagactcatcttgtaa
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