Capsella rubella (pink shepherd's-purse): 17893276
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Entry
17893276 CDS
T02984
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17893276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17893276
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
17893276
mRNA degradation factors
5'-3' decay
Lsm complex
17893276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
17893276
NCBI-ProteinID:
XP_006298814
UniProt:
R0G7V2
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ
YCDIPLGLYVIRGENVVLIGELDTEREELPPNMIRVSEAEIKRAQKVEREASELRGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctggtcctgaggatatctatctttcaacctcactcgctagttatctcgat
agaaaactacttgtgctccttagagatggtagaaagctgatgggaacactccgttctttt
gatcaattcgccaatgcggttctagaaggtgcgtgcgagagggtaattgttggtgaacaa
tactgcgacattcctttaggcctctatgtaatccgtggagagaatgttgtcctgattggt
gagctggacacggagagagaagagcttcctcctaatatgattcgcgtttcagaggcagag
attaaaagggcgcaaaaggtggagagggaagcgagtgagctgagaggaacaatgaggaag
aggatggagttccttgactttgattaa
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integrated database retrieval system
