Capsella rubella (pink shepherd's-purse): 17893463
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Entry
17893463 CDS
T02984
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17893463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17893463
03110 Chaperones and folding catalysts [BR:
crb03110
]
17893463
03029 Mitochondrial biogenesis [BR:
crb03029
]
17893463
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17893463
Enzymes [BR:
crb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
17893463
Messenger RNA biogenesis [BR:
crb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
17893463
Chaperones and folding catalysts [BR:
crb03110
]
Heat shock proteins
HSP60 / Chaperonin
17893463
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
17893463
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
17893463
Exosomal proteins of other body fluids (saliva and urine)
17893463
Exosomal proteins of breast cancer cells
17893463
Exosomal proteins of colorectal cancer cells
17893463
Exosomal proteins of bladder cancer cells
17893463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
17893463
NCBI-ProteinID:
XP_006296696
UniProt:
R0HIU3
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MYRVLSKLSSSIGSSTSRKLVSGRIISSRNYAAKDISFGVGARAAMLQGVSEVAEAVKVT
MGPKGRNVIIENSYGGPKITKDGVTVAKSISFQAKAKNIGAELVKQVANATNKVAGDGTT
CATVLTQAILMEGCKSVAAGVNVMDLRVGINMAIAAVVSDLKSRAVMISTPEEITQVATI
SANGEREIGELIARAMEKVGKEGVITVADGNTLDNELEVVEGMKLARGYISPYFITDEKT
QKCELENPIILIHEKKVSDMHSLLKVLEAAVQSSRPLLIVAEDVESDALAMLILNKHHAG
LKVCAIKAPGFGDNRKASLDDLAVLTGAEVISEERGLSLDKIRPELLGTAKKVTITRDDT
IILHGGGDKKLIEERCEELRSANEKSTSTFDKEKTQERLSKLSGGVAVFKVGGASETEVG
ERKDRVTDALNATRAAVEEGIIPGGGVALLYATKALDNLQTQNEDQRRGVQIVQNALKAP
AMTIAENAGYDGSLVVGKLLEQDDSNFGFDAAKGTYVDMVKAGIIDPVKVIKTALTDAAS
VSLLLTTTEASVLVKADVNTPKHVPDMASMGM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgagtgctgtcaaagttatcttcttcaattggttcgtctacttccaggaaactg
gtttctgggcggattataagtagtagaaactatgcagccaaggatatcagttttggggtc
ggtgctcgggcagctatgctgcagggtgtatccgaggttgcagaagctgtgaaagtcaca
atggggccaaagggaagaaatgtaatcatcgagaacagttacggtggaccaaagatcaca
aaggatggtgtcaccgtggcaaaaagcatatcgtttcaagcaaaagctaagaatattggt
gcagagctcgtgaaacaggttgcgaatgctactaacaaggttgctggcgatggtaccact
tgtgccactgttttgactcaggcgatactcatggaaggttgcaagtcagtggctgctggt
gtaaatgtgatggatttgcgtgttggcataaatatggcaattgctgcagttgtctctgat
ttgaaaagcagagctgttatgatcagcacccctgaagagattactcaggttgctactata
tctgcaaatggggagcgtgagataggggaactaattgcaagagccatggagaaagttgga
aaggaaggggttatcaccgttgctgatggtaacactttagataacgagctggaagtagta
gaaggaatgaagctagccagaggttacatttctccatattttattacagatgagaagacc
cagaaatgcgagcttgaaaatcccatcatccttattcatgagaagaaggtgtcagacatg
cactctttgttgaaagttcttgaagcagctgtgcaaagtagcagaccacttcttatagta
gcagaagatgttgagagtgatgcattagctatgcttattctcaataagcatcatgctggg
cttaaggtatgcgctatcaaggctccggggttcggtgacaacaggaaagcaagcttagat
gatcttgcggttcttactggtgcggaggtcatctctgaggagcgcgggctatctctagac
aagattcgccctgaattgcttggaactgcgaagaaagttaccatcacccgtgatgacact
attatcctacatggtggtggtgataaaaagctgatcgaagaaagatgtgaagagttaaga
tcagccaatgaaaagagcacttccacttttgataaagagaaaacgcaagaaagactctca
aaactatcaggtggtgttgcagtcttcaaggttggaggggcaagtgaaactgaagttggg
gaaagaaaagacagggtcactgatgcgttaaacgctacgagagcagccgtcgaagaaggc
attataccgggtggtggtgtggctctattatatgctacaaaagctttagacaacctgcaa
actcaaaacgaagaccaaagaagaggtgttcagattgttcagaatgctctcaaggctcct
gcaatgacaatagctgaaaatgctggttacgatggttctttagtggttggcaagttatta
gagcaagatgacagcaatttcggtttcgatgctgccaaaggtacatatgtggatatggtg
aaagctggaattatagacccggtgaaggttatcaaaactgccttaactgatgctgctagc
gtttctttgctattaacaacgacagaagcctcagtgctagtgaaggcggacgtgaacact
ccaaagcatgtccctgatatggccagcatgggcatgtga
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