Capsella rubella (pink shepherd's-purse): 17893784
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Entry
17893784 CDS
T02984
Name
(RefSeq) polygalacturonase QRT2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17893784
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
17893784
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
17893784
NCBI-ProteinID:
XP_006299494
UniProt:
R0G9Q0
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MYEKFINLSAFLLMFLPCCLSSYPFDHRDDPFKASDVYYETSHLHGHITRNSHTKSHHGY
APRSSPQAFNVNSFGAKANGNDDSQAFMKAWQSACSSTGIVYVVVPKNRKYTIKPVTFSG
PCKSSMIVFKIYGMIEAWENPSDYKVRRRWIVFENVTNLRVEGGGRIDGNGHIWWSKSCK
INPKLPCLGAPTAVMFMECNNLRVSNIRLENAQQMHLTFQNCQNVKALRLRVTSPGDSPN
TDGIHVSGSRNILIQDSVVGTGDDCISIVSGSENVRATGITCGPGHGISIGSLGAGNSEA
YVSNVVINKATLIGTTNGVRIKTWQGGRGMAKNIIFQDILMKNVTNPILINQDYCDRVES
CPEQKSAVQVSNVLYKNIQGTSSTPVAVKFQCSKSIPCRGISMQDVELVDQTQQDVSKAS
CSNVRLNTRGNVSPLCT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaaagttcataaacttgtcagcatttctcttaatgtttctcccttgttgtctc
agcagctacccatttgatcatagagatgatcctttcaaggcttccgatgtttattacgaa
accagtcatctacatggtcacattacacgcaacagtcatacgaaaagccaccatggttat
gctcctagatcttctcctcaagcttttaacgtcaactcttttggtgctaaagccaacgga
aacgacgattctcaggcgttcatgaaagcttggcaatcagcttgttcgtcaactggaata
gtttacgtcgtggttccgaaaaatagaaaatacacgattaaaccggttacgttctccggt
ccatgtaaatcatccatgattgtttttaagatctacggaatgattgaggcatgggaaaat
ccatcagactacaaggtacgaaggcgctggattgtgtttgaaaacgtcactaaccttcgt
gttgaaggaggtggccgcatcgacggtaatggacatatttggtggtcaaaatcttgcaaa
atcaaccctaaacttccttgcctgggtgctccaacggcggttatgtttatggagtgtaac
aacttgagagtaagtaacattaggttggaaaacgcacagcaaatgcatttgacgtttcaa
aactgccaaaacgtgaaggctttgcgtcttagggtcacatctccgggtgatagtcctaac
accgatggcattcacgttagcggaagtcgcaatatcttaattcaagactctgtcgttggt
actggtgatgattgtatatcgatagtgagtgggtcggagaatgtgagagcgacaggcatt
acatgcgggcctggtcatggaatcagtattgggagtttgggagccggtaactcagaagca
tatgtttcaaatgtggtaatcaacaaagcaacccttataggaaccactaatggtgtgaga
atcaagacttggcagggaggacgtggaatggcaaagaacatcatattccaagacatttta
atgaaaaacgttacaaaccctatactcatcaaccaggactactgcgatcgtgttgaatca
tgccccgaacagaaatcggcggtacaagtgagcaacgtgttgtacaaaaacatacaaggg
acgagctcaacgcccgttgctgtgaagtttcagtgcagcaagagcatcccatgtcgagga
atctcaatgcaagacgttgaactggtcgaccaaactcagcaagatgtttccaaagcttct
tgctccaacgtgaggttgaacacccgaggaaatgtttctcctctttgcacttga
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