Capsella rubella (pink shepherd's-purse): 17893834
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Entry
17893834 CDS
T02984
Name
(RefSeq) protein CTR9 homolog isoform X2
KO
K15176
RNA polymerase-associated protein CTR9
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17893834
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
17893834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_14
TPR_19
TPR_11
TPR_16
TPR_17
TPR_6
TPR_CcmH_CycH
TPR_7
TPR_9
ANAPC3
TPR_10
ARM_TT21_C
ARM_TT21_5th
Fis1_TPR_C
ARM_TT21_4th
NatA_aux_su
UBA_N4BP1
Motif
Other DBs
NCBI-GeneID:
17893834
NCBI-ProteinID:
XP_006296878
UniProt:
R0G360
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR
QILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKNREKEEQFIMATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNRGRFSE
SLQLYKRALQVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVALGIM
DLQANDSIGMRKGMERMQQAFEIYPYCASALNYLANHFFFTGQHFLVEQLTETALAVTTH
GPTKSHSFYNLARSYHSKGDYEKAGMYYMAAIKETDNKPQEFVFPYFGLGQVQLKLGEFK
GSVVNFEKVLEVYPDNCETLKALGHLYTQLGKTDKALEYMRKATKLDPRDAQAYVGLGEL
LIPSDTGAALDAFKMARTLMKKGGQDVPIEVLNDIGALHFEREEFESALDNFKEALGDGI
WISFIDEKEKLEQTGVSVLGYKDTGIFHKLIESGHSVDVPWNKVTTLFNLARLLEQLHKT
EAATFLYRLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALSLLGE
LELKNDDWVKAKETFRAASDATDGKDSYAILSLGNWNYFAAMRNEKRNPKLEATHLEKAK
ELYTKVLTKHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWVNLA
HVYFAQGNFALAVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQNCKKTLLRAIHLTP
SNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHVHGFD
DKKIQTHVQYCSHLLEASKVHREAAEREELQNRQRLEVARQAALAEEARRKAEEQRKYQL
EKRKQEDELRRLKQEEEKFQRIKEQWKTSTPGSHKRKDRVEDDDGEGKPSERRRKKGGKR
RKKDKSSRARHYEDDEEEVVTMDDHNEVEDEDGNTNYNREDELTNQETEEPVDDDAHDLL
AAAGLEDPDVDDDEVPASVVRRRRALSSSDEEGELMENQPNSILQREKEENNKEEEVANV
EEEEEEEEAN
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgtttacatacctgttcagaattcggaagaagaagttagggttgttcttgat
cagctccctcgagacgcttctgatatccttgatatccttaaagccgaacaagctcctctc
gatctctggctcattatcgcgagagagtacttcaaacaaggaaaaattgaacagttccgt
caaatattggaagaagggtcaagttctgatattgacgagtactatgctgatgttaagtat
gagaggatagcaatcttgaacgctctaggtgcgtattacagctacctaggtaaaactgag
acgaagaacagagaaaaagaggagcagtttatcatggcaacacaatattataacaaagca
tcgagaatcgatatgcatgaaccttccacttgggttgggaaaggtcagctcttactggct
aagggtgaaatagataatgcacttcaggcatttaagattgtgttagacactgcccctgat
aatgttcctgctcttctgggtcaggcttctgtagaatttaaccggggacgtttttccgag
tcattacaactctacaagagggccttgcaagtatttcccgggtgtcctgcagctgtgaga
ttgggaattggtctttgtcgttataagttggggcaactagataaagcacggcaagcgttt
gatcgtgttttgcagctagatcctgataatgttgaggctcttgtggcacttggaatcatg
gatttgcaagcaaatgattctataggaatgaggaaaggaatggagagaatgcagcaagca
tttgagatttatccctattgcgcatcagccctaaattatttggccaatcacttttttttc
actggccagcactttcttgtggagcagctgactgaaaccgcattagcggtcacaactcat
ggcccaacaaagtcacattctttttacaatttagcacggtcatatcatagcaagggggac
tatgaaaaggctggaatgtactatatggcagccatcaaagaaactgataataagccacaa
gaatttgtatttccttactttggtttgggtcaagtacaacttaagttgggggagtttaaa
ggatctgtggttaactttgagaaagtattagaagtctatcctgataactgcgaaactctg
aaggctctgggacacttatacacccagcttggaaaaactgataaggcccttgagtacatg
cggaaggccacaaaacttgatcctcgtgatgcccaggcatatgttggccttggtgagctg
ctgataccttctgacacaggggctgcacttgatgccttcaaaatggcaagaacactcatg
aaaaagggagggcaagacgttcctatagaagtcctaaatgacattggtgctttacatttt
gagagagaagaatttgagtctgcgcttgacaattttaaggaggctctgggtgatggaata
tggattagcttcattgatgaaaaagaaaaattagaacagacgggtgtatctgttctaggg
tacaaggatactggcatttttcataagctgattgaaagtggccactctgtcgatgtacct
tggaataaagtcacaactttgtttaacctggctagattacttgagcagctacacaaaacc
gaagcagcgacgtttctgtatcgcttgatacttttcaagtatcctggctacatagatgct
tacttgaggcttgctgcgagtgcaaaagctcagaacaatcttcctctggccattgaactg
gtcaatgaagctctgaaagtggacgataagaatccaaatgcgttgtctctgcttggtgaa
ttggagcttaaaaatgatgactgggttaaggctaaggaaacctttcgagctgctagtgat
gcgactgatgggaaggactcatatgctattctttccctggggaactggaattatttcgcg
gcaatgcgtaatgagaaaagaaatccaaaattagaagctacacatctggagaaggccaag
gaactctatactaaagtcctgactaaacataattccaacatgtatgctgccaacggttct
ggcattgtattggcagagaaaggccaatttgatattgcgaaggatgtttttactcaggtt
caagaagctgcgagcggaagtgtatttcttcagatgcctgatgtatgggtgaatctggct
catgtctactttgctcaagggaattttgccttggccgttaaaatgtatcaaaactgcttg
cggaagttcttttacaacacagactctcaaattcttctttacttagcccgtacccattat
gaggctgagcagtggcaaaattgcaaaaagacactattaagggccattcacttgactcct
tcaaattacacgttcagatttgatttgggtgctgtaatgcagaaatcatcatcttccaca
ctgcaaaagaaaaaaagaacagctgatgaggtgcgctcaacagttgcagaagcagagaat
gctgttcgtgtattcactcaattgtctgctgcttcagacctccatgttcatgggtttgat
gacaagaaaatacaaacccacgttcagtattgctcgcacttgctggaagcatcaaaagtt
caccgtgaagcagctgagcgtgaagagctgcagaaccgacagagactagaagttgctcgt
caggctgctttggcagaagaagcacgccgtaaagctgaagaacagaggaaataccagttg
gagaaacgaaagcaggaggatgagctgagacgcctaaagcaagaagaagaaaaatttcaa
cgtataaaggaacaatggaagacctctactcctggatctcataagcggaaggatagagtt
gaagatgatgatggggaaggcaagcccagtgagcggagaaggaagaaaggcggaaagaga
agaaagaaggacaaaagctcaagggctagacactatgaagacgacgaagaagaagttgtt
actatggatgatcataatgaagtggaagatgaagatggtaacactaattataacagagaa
gacgagttgacgaatcaagaaactgaagaacctgtggatgatgatgctcatgatcttctc
gctgctgctgggctcgaagaccctgatgttgatgatgatgaggtgcctgcttccgttgtg
agacgaagaagggcgctatcatcatcagacgaagaaggtgaactgatggagaatcagcca
aattcaatcctccagagagagaaagaagaaaacaataaggaagaagaagttgctaacgtc
gaggaagaagaagaggaggaagaagccaactga
DBGET
integrated database retrieval system
