Capsella rubella (pink shepherd's-purse): 17894002
Help
Entry
17894002 CDS
T02984
Name
(RefSeq) phosphatidylinositol glycan anchor biosynthesis class U protein isoform X1
KO
K05293
GPI-anchor transamidase subunit U
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
17894002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIG-U
Motif
Other DBs
NCBI-GeneID:
17894002
NCBI-ProteinID:
XP_023643184
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MAEEQKTKPCRFWIWALTSVFFRLILISFKGNLNLSSRPEVSTPLTSIRRLAEGYWLKQA
SMSPYAGSMYHGSPLLLSVLGPLTVQRIKGQPSHLLCSLVFVIADILSAMLLRGIGQKLQ
MAYGLNARLLGFLKSSRDKVILPCGDIAALVYLWNPFTIVSCVGLSTSPIENLAVILALY
GAVTRRVPLAAFGLVMATHLSLYPATLAIPIIILLGYGLDAPPIKLFLQTRSVENEKSST
STVSKQAKSKQTTRLPFLWKTVVHFLFWVLLWSLYVLVLCALSLNKYGGLEEMFKRTYGF
ILSIEDLSPNIGVFWYFFAEVFDFFRNFFLIVFHVNILFMLLPLAIRLKHRPCFLAFIYL
AISSILKSYPSVGDSALYLSLWALFVNELVDMKFSFFLFCGYLGISLLSPVMHNLWIWRG
TGNANFYFGNAIGYACFQIVFVVESVSAMLNHDRALKRSNSNHGKSQELSH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcagaagacgaaaccatgccgattctggatttgggccttaacttccgta
tttttccgattaattctgatctccttcaagggaaatctcaatctctcttcccgtccggag
gtctcgacacctctcaccagcattcgccgccttgctgaaggttattggttgaagcaggca
tcgatgtcaccatacgcaggatcaatgtatcatggctcaccattgctgctctcggttctt
ggacctctcacggttcagaggattaaagggcaaccaagtcatctcttgtgcagcttggta
tttgttattgcagatatattaagtgcaatgcttcttcgaggtattggtcagaaactccag
atggcttatggattgaatgcgagactacttggctttcttaagtcatcaagggataaagtg
atcctaccttgtggtgatattgctgctcttgtgtatttgtggaatccattcaccatagtt
tcttgtgtgggtttatcaacttctccaattgaaaatctggccgtcatactggctctttat
ggagcagttactcgacgagttcctctggctgcatttggcttagtcatggccacacattta
tctctttatcctgcaactcttgcaattccaataattattctattgggatatggtttggat
gctcctcctataaaattgttccttcagaccagaagtgtagaaaatgagaagagttcaacc
tctactgtttctaagcaagccaagtcgaaacagactacacgccttccgttcttatggaaa
acagttgtgcacttcttgttctgggtacttctgtggtcgctttatgtgctggttttatgc
gccttatcactgaataaatatggtgggcttgaggaaatgttcaagaggacgtatggtttc
attctcagtattgaagatctttcaccaaacattggagtcttttggtactttttcgcagaa
gtctttgacttcttcagaaactttttcctgatagtttttcacgttaatattctgtttatg
ttactccctttagccatacggttaaaacatcggccttgcttcctggctttcatatactta
gcgatctcctcgattcttaaatcttacccttcagttggagattctgctttatacttgagc
ttatgggcattgtttgtcaatgagttagtagatatgaagttctccttcttcctcttctgt
ggatatcttgggatttctctcctcagccctgtgatgcacaatctctggatatggcggggc
acaggaaacgcaaatttctactttggaaacgctattggctacgcgtgctttcagatcgtt
tttgtggttgagagcgtaagcgcaatgctaaaccatgacagggctctgaagagatctaac
tcgaaccatggaaaaagtcaagagctaagccattga
DBGET
integrated database retrieval system
