KEGG   Capsella rubella (pink shepherd's-purse): 17894043
Entry
17894043          CDS       T02984                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03018  RNA degradation
crb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    17894043
  09123 Folding, sorting and degradation
   03018 RNA degradation
    17894043
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crb03019]
    17894043
   03041 Spliceosome [BR:crb03041]
    17894043
Messenger RNA biogenesis [BR:crb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     17894043
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     17894043
Spliceosome [BR:crb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    17894043
SSDB
Motif
Pfam: LSM M11L
Other DBs
NCBI-GeneID: 17894043
NCBI-ProteinID: XP_006300574
UniProt: R0GCK9
LinkDB
Position
Unknown
AA seq 98 aa
MATATGLESLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQVVLG
LYIIRGDNIGVIGELDEELDASLDLSKLRAQPLKPVVH
NT seq 297 nt   +upstreamnt  +downstreamnt
atggctacagctactggactcgagtctcttgttgatcagattatttcggtgattacaaat
gatggacgcaacattgtgggagttcttaaaggttttgaccaagctacaaatataatcctt
gatgaatctcatgaacgtgtgttttccacaaaggaaggagtacaacaagttgtgttgggt
ttgtacattatcagaggcgacaacataggtgttattggggagctagacgaggagcttgat
gcaagcctggacttatcaaaactgagagctcaacctttgaaacccgtcgtgcattga

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