Capsella rubella (pink shepherd's-purse): 17894399
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Entry
17894399 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17894399
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
17894399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17894399
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
17894399
DNA repair and recombination proteins [BR:
crb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
17894399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Mor
Motif
Other DBs
NCBI-GeneID:
17894399
NCBI-ProteinID:
XP_006300503
UniProt:
R0GCR9
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MGEHSPSQPSSHTHLPDQPQSPNPENPNPIPPETNDDDSVSSVGVSGSIVSSTTIEAPRV
TELGNVSSPPSKIPLRPRKIRKLSPEDEASGNSDGFKPEHNSLSQMMTPTATNPAVKSKL
SQSRAVTVPRIHARSLTCEGELEAALHHLRSVDPLLASLIDIHPPPTFETFHTPFLALIR
SILYQQLAAKAGNSIYTRFLEICGGENGVVPETVLPLTPQRLRQIGVSGRKASYLHDLAR
KYQNGILSDSGIVNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGV
QMLNDLPYLPRPSQMEQLCEKWRPYRSVASWYMWRLIESKGTPPNAAAVTAGAALSFPQL
EDIQQQQQQQHQQQQPQLMDPLNSVFSIGAWGQT
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaacattcaccttctcaaccatcttcacatactcatctccctgaccaaccacaa
tcacccaatcccgaaaaccctaatccaatcccaccggaaaccaacgatgacgactccgtt
tcgtccgtcggagtttctggctcaattgtgtcatcaaccaccattgaagcaccacgggtc
actgaattaggtaatgtatcgtctccaccttccaaaatcccactccgtcctcgaaaaatc
cggaagctttcacccgaagacgaggcttccggtaacagcgacgggttcaagcctgagcat
aatagcctctctcagatgatgacgccgacggctacaaatccagccgtgaagagtaaatta
tcacagtcacgggctgtaaccgtgccgagaatccacgcgaggtctctcacctgtgaaggc
gagcttgaagcagcgcttcaccatctccgaagtgttgatcctctgctcgcgtcgttaatt
gatatccatccgccaccaacgttcgagacttttcatactccgttcttggctctcattaga
agcatcctttaccagcagttagcagctaaagcagggaattctatctacacacgcttcctt
gaaatatgcggaggtgaaaatggcgtcgtcccagagactgtcttgcctttaacacctcaa
cggcttcgtcaaataggtgtttctgggcgtaaagctagttaccttcatgatcttgctagg
aaatatcaaaatgggatcttgtcggattctggaatagttaacatggatgagaaatctttg
ttcacgatgctaacgatggtgaatgggatcgggtcatggtcggttcatatgtttatgata
aactctcttcatagacccgatgtcttgccagttaatgaccttggtgttaggaaaggtgtg
cagatgcttaatgacttgccgtatttgcctcgtccatctcaaatggagcagctttgtgag
aaatggcgcccgtatagatcagtagcgtcatggtacatgtggcggcttattgaatctaaa
ggtacaccaccaaatgctgcggctgtgacagccggagctgctctttcgtttccacagttg
gaagatattcaacaacagcaacaacaacaacatcagcaacaacagcctcagcttatggac
cctcttaatagcgtgttcagtatcggggcatggggacaaacgtag
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