Capsella rubella (pink shepherd's-purse): 17894467
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Entry
17894467 CDS
T02984
Name
(RefSeq) ABC transporter G family member 39
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17894467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17894467
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
17894467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_28
AAA_23
AAA_33
RsgA_GTPase
AAA_30
AAA_25
nSTAND3
ABC_ATPase
DUF4070
Motif
Other DBs
NCBI-GeneID:
17894467
NCBI-ProteinID:
XP_006300648
UniProt:
R0GD74
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MLGGRDDDPVGTMSGRVSLASTSHRSLVGASKRFKDVFVSQAADEVFGKSERQEEEDVEL
RWAAIERLPTFDRLRRSMLPQTKVNGKIELEDVDISRLEPKEKKQLIDMILSVVEEDNEK
FLRGLRERTDRVGIQVPKIEVRYENISVEGDVCSASRALPTLLNVTLNTIESILGFFHFL
PTKKKKIQILKDISGIIKPSRMTLLLGPPSSGKTTLLQALAGKLDDTLQMSGRITYCGHE
FHEFVPQKTCAYISQHDLHFGEMTVRETLDFSGRCLGVGIRYQLMAELSRREREEGIKPD
PKIDAFMKSIAISGQETSLVTDYVLKILGLNICADILVGDVMRRGVSGGQRKRLTTGEML
VGPGKALFMDEISTGLDSSTTFQICKYMRQLVHISDVTMIISLLQPAPETFELFDDIILL
SEGRIVYQGSRDNVLEFFEYMGFQCPERKGVADFLQEVTSKKDQEQYWDRKEQPYSYVSV
SDFSSGFNSFHTGQELTSEFRVPYDKAKTHSAALVTQKYGISNWELFKACFDREWLLMRR
NSFVYVFKTVQITIMSLITMTVYLRTEMHVGTVQDGQKFYGALFFSLVNVMFNGLGELAF
TVMRLPVFYKQRDLLFYPPWAFALPVWLLKIPLSIIESGIWIGLTYYTIGFAPSAVRFFR
QLLAYFCVNQMALSLFRLIGAIGRTEVISNSIGTFTLLTVFTLGGFIIAKDDMQPWMTWA
YYLSPMMYGQTAIVMNEFLDERWSSPNYDTTINAKTVGEVLLKSRGFFTEPYWFWISIVA
LLGFSLLFNICYILALMYLNPIGNSKATVVEEGKEKQKGTEGSVVELNISLSNGTKRGLV
LPFQPLSLAFNNVNYYVDMPAEMKAQGIKSDRLQLLRDVGGAFRPGILTALVGVSGAGKT
TLMDVLAGRKTGGYTEGSISISGYLKKQETFARVSGYCEQNDIHSPHVTVYESLIYSAWL
RLSVDIDAKTREMFVEEVMDLVELKPLRNSIVGLPGVDGLSTEQRKRLTIAVELVANPSI
IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGQVI
YAGSLGHHSQKLIEYFEAVEGVPKIKDGYNPATWMLDVTTPSMESQMSLDFAQIFTNSSL
YQRNQELIKELSTPPPGSKDLYFRTKYAQPFFTQTKACFWKQYWSYWRHPQYNAIRFLMT
VIIGVMFGLIFWQMGTKIENEQDVNNFFGAMYAAVLFLGATNAATVQPAIAIERTVFYRE
KAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYSMIGCNWTVTKFLWFYYYMLTSFIY
FTLYGMMLMALTPNYYIAGICLSFFLSLWNLFSGFLIPRPQIPIWWRWYYWATPVAWTLY
GIITSQVGDKDSMVHITGIGDIGLKTLLKEGFGFEYDFLPVVAVVHIAWILLFLFVFAYG
IKFLNFQRR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgctaggaggacgagatgatgatccggtcgggacaatgagcgggagagtgagtttggcc
tcgaccagccacaggagtttggtgggagcttctaaaaggtttaaagatgtgtttgtgtct
caggcagcggacgaggtgtttgggaagagcgaaaggcaggaggaagaggacgtcgagctc
cgttgggccgcgattgagagattgccgacctttgatcggctacgtagaagcatgttgcca
caaacaaaggtcaatggtaagattgagcttgaggatgttgatatctcaaggctcgaacct
aaggagaagaagcaacttatagatatgattttgagtgttgttgaagaagacaatgaaaag
tttctacgtggattgagagaaagaacagacagagttgggatccaagttccaaaaattgaa
gttaggtatgagaacatttcagtggaaggagatgtgtgtagtgcaagtagagcacttcca
actctactcaatgttaccttgaatacaatagagagcattctaggattcttccacttcctt
ccaactaaaaagaagaagattcagatacttaaagatatcagtggcattataaaaccatca
aggatgaccttgttacttggtccaccaagttcaggcaaaacaactttgttacaagctttg
gctgggaagctcgatgataccctccagatgtcggggaggataacttattgcggtcatgag
tttcacgagtttgttcctcaaaagacgtgtgcttacattagtcaacatgaccttcacttt
ggagaaatgacggtgagagagacactggatttctcgggacgatgtctaggtgttgggatt
aggtaccagttgatggctgagctctcacggagggaaagagaagagggaattaaaccagac
cctaaaattgatgcgttcatgaaatctattgcgatatcagggcaagaaactagtttggtt
acagattatgtacttaagatacttggtctaaacatatgtgctgacatacttgttggagac
gtaatgagacgaggtgtttctggtggacagcgaaaacgtctaacaacaggagagatgttg
gtaggaccaggaaaagctctcttcatggatgaaatatcaacaggtttggatagttccaca
acattccaaatttgcaagtacatgaggcaactagttcatatctcggatgtcacaatgatt
atatcacttctacaacctgcaccagagacttttgagctattcgacgacattatcttactc
tcagagggacgaatcgtctaccagggctcacgggacaacgttcttgagttctttgagtac
atgggtttccaatgtcctgaaaggaaaggcgttgcagatttcttgcaagaagtaacatct
aagaaggaccaagaacagtattgggacaggaaagaacaaccttacagctatgtgtccgta
agtgatttctcaagcgggtttaactcttttcacaccgggcaagaactcacttcagaattc
agggttccttatgacaaagctaaaacccattctgctgcactagtcacacaaaagtatggt
atatcaaactgggaactcttcaaagcatgctttgatagagaatggctacttatgagacgc
aactcctttgtgtatgtgtttaagaccgtccagataaccatcatgtctttgattaccatg
acggtctatctcaggacagaaatgcatgtcggcacggtgcaagatggtcaaaagttttat
ggtgctctttttttcagcttggtcaatgtaatgtttaatggactaggtgaactagcattc
actgtaatgaggctcccagtgttttacaagcagagagacttattgttctatcctccatgg
gctttcgccttacccgtatggcttctgaagattccgttatctataatcgaatcaggaata
tggatcggtcttacatattatacaatcggttttgctccttctgctgtaaggtttttccgg
cagttgttggcatacttctgcgtgaatcagatggctctttctttgtttagattgattgga
gccattggaagaactgaagtaatctctaactcaatagggaccttcacattgctaactgta
tttactcttggaggcttcattattgctaaagatgatatgcaaccgtggatgacttgggct
tattatttgtcccctatgatgtatggacaaactgctattgttatgaatgaatttctcgat
gagcgatggagcagtcctaactatgataccaccatcaacgcgaaaacagttggagaagtc
ttacttaagagccgaggcttcttcacggagccatattggttttggatcagtattgtggcg
cttcttggattttctctgttgttcaatatctgttacatactagccttgatgtatttgaat
cctattggtaactccaaagctacagttgtggaagaaggtaaagaaaaacagaaaggaaca
gaaggttctgttgtggaactcaatatttctttaagtaatggtacaaaaagaggattggtt
ttacctttccaaccactttctcttgcattcaacaatgtgaactactatgtggatatgcct
gcagaaatgaaggctcaaggaattaaaagcgatcgccttcaattactaagagacgttggt
ggagctttcagaccaggcatattgacagcattggtcggtgttagtggtgcaggtaagaca
acgttaatggatgtcttagctggtaggaaaacaggtggctacaccgaagggagtattagc
atctctggttaccttaagaagcaagaaacatttgctcgagtcagtggttactgtgaacaa
aatgatatccattctccacatgttactgtttatgaatctctcatctattcagcttggctt
cgtctttcagttgatatagatgccaaaacacgagagatgtttgttgaagaagtgatggat
ttggttgagctcaaaccccttagaaactctatagttggccttcctggagtagatggtctt
tcaacagaacagaggaaaaggcttactattgcagttgaattggtagctaacccatcaata
atcttcatggatgaaccaacttctggtcttgatgcaagagctgctgctattgtcatgcgc
actgttaggaataccgtagataccggaagaactgttgtttgtacaattcaccagcctagc
atcgacattttcgaatccttcgatgagcttctgttgatgaaacgaggaggccaagttata
tatgctggaagcctagggcatcactctcagaaactaattgaatactttgaggctgttgaa
ggtgttccaaagatcaaagacggatacaatcctgcgacgtggatgcttgacgttactact
ccttcaatggagtcacaaatgagcttggactttgctcaaatattcaccaactcctctctt
tatcagagaaatcaagaactcatcaaagagctaagtacaccaccacctggatcaaaggat
ctttacttccgaacaaagtatgcgcaaccgttttttactcaaactaaagcttgcttctgg
aagcagtactggtcatactggagacatcctcagtacaatgccatcaggtttctcatgaca
gtaataattggtgtcatgtttggtctaattttctggcaaatgggaacaaaaatagagaac
gaacaagatgtgaataatttctttggagccatgtatgctgctgttttgtttcttggtgcc
accaacgctgccacagttcaacccgcaatcgccatcgagcgaacagttttctaccgcgaa
aaagcagctggaatgtactctgccattccctatgcaatttctcaggtagcagtggaaatc
atgtataacacgatacaaacgggagtttacacgctaatcctgtactcaatgataggatgc
aactggactgtgaccaaattcttgtggttctactactacatgttaacaagcttcatctac
tttacactatatggtatgatgcttatggccttgacacctaactattatatagccggaatt
tgcttgtctttcttcctgagtctctggaatctcttctccggtttcctcatccctagaccg
caaataccaatatggtggagatggtactactgggcaacacctgtggcttggacattgtat
ggaatcatcacatctcaagtaggagacaaggactcaatggtgcacatcactggaatcgga
gacataggtctgaaaacgttgctgaaagaaggatttgggtttgaatacgatttcttacca
gttgtagctgttgtccacattgcttggatcttgctctttctttttgtctttgcctatggt
atcaagttcctcaacttccaaagaaggtga
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