Capsella rubella (pink shepherd's-purse): 17894545
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Entry
17894545 CDS
T02984
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17894545
Enzymes [BR:
crb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
17894545
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Ortholog
Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
17894545
NCBI-ProteinID:
XP_006302330
UniProt:
R0IER6
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MRMTLVHLSLSLFSCLLLVLSPTFVASTTPVSDPDLVVQEVNEKINASRRNLGVLSCGTG
NPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDAVNPKPGTLRY
AVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGVNVHIAGGACITVQYVTNVIIHGI
NIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGS
TAITISNNYMTHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN
NDYTHWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPQSKWKKWNWRSEGDLF
LNGAFFTASGGRASSSYAKASSLSARPSSLVASVTGSAGALFCKKGSRC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgacacttgttcacttgtctctctccctcttctcatgtcttctccttgtcctt
tctccgaccttcgttgcctccaccactcccgtctccgaccctgacctcgttgttcaagaa
gttaacgagaagattaatgcgtctaggaggaatctaggagtgctctcatgtgggacagga
aatccaatagacgactgttggagatgcgacccgaaatgggagaaaaaccgacaacggctg
gccgattgcgccatcgggtttggcaaacacgcaataggcggccgtgacggcaaaatctac
gtggtgactgattctagcgacaaagacgcggtcaaccctaaacccggaaccctaagatac
gcggtgatccaggacgagccgctctggataatcttcgcgcgtgacatggtcattaagcta
aaagaagagcttattatgaactctttcaagaccatagacggacgtggagtgaacgttcac
atcgctggtggcgcgtgcatcacggttcagtacgtgaccaacgtcatcatccacggtatc
aacatccacgactgtaaaagaaaaggtaatgcttacgtcagagactctccgtcgcattac
gggtggaggacggcgtcggacggtgacgccgtctcgatctttggtggctcacacgtgtgg
gtagaccattgctcgttgtcgaactgtgctgacggtctgatcgacgccattcatggatca
acggctattacgatctctaataactacatgacgcaccataataaagttatgcttttagga
cacagtgactcgtacacgagagacaagaacatgcaagtcaccattgcctttaatcacttt
ggtgaaggtcttgttcaaagaatgccaagatgtagacatgggtattttcatgtggtgaat
aatgattatacacattggcaaatgtatgcaattggtggtagtgctgccccaacgattaat
agtcaggggaataggtttcttgctcctaatgatcatgtctttaaagaagtgactaagtac
gaagatgcaccacaaagcaaatggaagaaatggaattggagatcagaaggtgatttgttc
ctaaacggtgcgtttttcacggcatccggtggaagagcctcgtcaagctatgcaaaggct
tcgagtttgtcggctagaccgtcttcattggtggcttctgtcacgggcagtgctggtgca
ctcttttgtaaaaaaggatctcgatgttaa
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