Capsella rubella (pink shepherd's-purse): 17894671
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Entry
17894671 CDS
T02984
Name
(RefSeq) solanesyl diphosphate synthase 1 isoform X1
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00900
Terpenoid backbone biosynthesis
crb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
17894671
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
crb01006
]
17894671
Enzymes [BR:
crb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
17894671
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
17894671
Prenyltransferases [BR:
crb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
17894671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
17894671
NCBI-ProteinID:
XP_006302333
UniProt:
R0GHM8
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MMTSSRNIDLGTMMMACGCGRRPFLPLGNFSKFGSSNKSYGGGNLVGSCRAVPTKPKEIS
LLNGIGQAQTVTFDLKPETEQQISLTDLFEVVADDLQTLNDNLLSIVGAENPVLISAAEQ
IFGAGGKRMRPGLVFLVSRATAELAGLKELTTEHRRLGEIIEMIHTASLIHDDVLDESDM
RRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGEIKQASS
LFDCDTKLEDYLLKSFYKTASLVAASTKGAAIFSRVETNVTEQMYEFGKNLGLSFQVVDD
ILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEKEPRLREIIESEFCEVGSLEEAIEMVR
EGGGIRRAQELAREKADDAIKNLQCLPRSGFRSALEQMVMYNLERID
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgtcatctcgaaacatagatttaggtacgatgatgatggcatgtggttgtggc
cgtcgtccgtttcttccgttgggcaatttctccaagtttggtagcagcaacaaaagctat
ggcggtgggaatcttgtggggagttgcagagccgtgccaacgaaaccaaaggagatctct
ttactcaatggtattggtcaagctcaaacagtgacttttgatttgaagccagagacagaa
cagcagatttcgttgacagacctgtttgaggtagtagctgatgatctgcagacattgaat
gacaatcttttatcgattgttggtgcagaaaatccagttttgatatctgcagcagagcag
atttttggagctggtggtaaaagaatgaggccgggtttggtcttccttgtatcacgagcc
acagcagaattggctggcctaaaggaactaacaactgaacaccggcgtttgggtgagatc
attgagatgattcacaccgcaagcttgatacacgatgacgttttagatgagagtgatatg
cgtagaggaaaggaaacagttcatgagcttttcggtacaagagtagcagtgttagctggt
gatttcatgtttgctcaagcatcatggtacttagcaaatcttgagaatctcgaagttatt
aagctcataagtcaggtgatcaaagactttgcaagcggagagataaagcaggcgtcgagt
ttgtttgactgtgacactaagcttgaggactacttactcaaaagtttttacaagacagcc
tctttagtggctgcgagcaccaaaggagctgccatcttcagcagagtcgagaccaatgtg
acagagcaaatgtatgagtttgggaagaatcttggcctctctttccaggtagttgatgac
atattggacttcactcagtctacagagcagcttgggaagccagcagggagtgatttggct
aaaggtaacttaaccgctcctgtgatttttgctctggagaaggagccgaggctgagagag
atcattgagtctgagttttgtgaggtgggttcactggaagaagcgattgaaatggtgaga
gaaggcgggggaatcaggagagcacaagagttggctagggaaaaggctgatgacgcgata
aagaatctgcagtgcctgcctcgaagtggcttcaggtcagctctagaacaaatggtgatg
tataatcttgaaagaattgattag
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integrated database retrieval system
