Capsella rubella (pink shepherd's-purse): 17894747
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Entry
17894747 CDS
T02984
Name
(RefSeq) long chain acyl-CoA synthetase 3
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00061
Fatty acid biosynthesis
crb00071
Fatty acid degradation
crb01100
Metabolic pathways
crb01212
Fatty acid metabolism
crb04146
Peroxisome
Module
crb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
17894747
00071 Fatty acid degradation
17894747
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
17894747
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
crb01004
]
17894747
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17894747
Enzymes [BR:
crb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
17894747
Lipid biosynthesis proteins [BR:
crb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
17894747
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of breast milk
17894747
Exosomal proteins of breast cancer cells
17894747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
17894747
NCBI-ProteinID:
XP_006300830
UniProt:
R0IAT8
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MAKSQYIVEVEKGKEGVDGGSPSVGPVYRSIYAKDGFPEPADDLVSAWDIFRLSVEKSPD
NPMLGRREIVNGKAGKYVWQTYKEVYDVVINLGNSIRTIGVGKGEKCGIYGANSPEWIIS
MEACNAHGLYCVPLYDTLGAGAIEFIICHAEVSLAFSEEKKISELLKTAPNSTKYLKNIV
SFGEVTNEQRAEAERVGLEIYSWDQFLKLGEGKHFELPEKKRNDVCTIMYTSGTTGDPKG
VLLTNESIIHLLEGVKKLLKTINEELTSKDVYLSYLPLAHIFDRVIEELFIYEAASIGFW
RGDVKILIEDIAALKPTIFCAVPRVLERIYTGLQQKLSDGGSIKKALFNFAFNYKHKNME
KGKTHEQASPICDKVVFKKVKEGLGGNVRLILSGAAPLAAHIESFLRVVACAHVLQGYGL
TESCGGSFVSIPNELAMLGTVGPPVPNVDIRLESVPEMGYDALASKPRGEICIRGKTLFS
GYYKREDLTQEVLIDGWLHTGDVGEWQPDGAMKIIDRKKNIFKLSQGEYVAVENLENIYS
HVAAIESIWVYGNSYESYLVAVVCPSKIQIEHWAKEHNVSGDFESICQNQKTKEFILGEF
NRVAKDKKLKGFELIKGVHLDTVPFDMERDLITPSYKKKRPQLLKYYQKEIDEMYNKTKK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagagtcaatacatcgtagaggttgagaagggaaaggaaggtgttgatggagga
agtccatcggttggtccggtttaccggagtatctacgctaaagacggttttcctgaaccg
gctgatgatctcgtcagtgcatgggatattttccgcctgtctgtggagaagtctccagat
aatcctatgcttggtcgcagagaaatcgttaatggaaaagctgggaaatatgtatggcaa
acttacaaagaagtatatgatgtagtcattaaccttggaaactctattagaactattgga
gttggaaaaggagaaaaatgtggtatctatggagccaacagtcctgaatggattataagc
atggaggcttgcaacgctcatggactctactgtgtacctttatatgacactctaggtgct
ggagcaatagaattcatcatttgtcatgctgaggtctcacttgctttttctgaggagaaa
aagatctctgagttattaaagacagctccgaattcaactaaatatttgaagaatattgtg
agctttggtgaggttacaaatgagcaaagagcagaagctgaaagagttgggttagaaata
tattcatgggaccaattcttgaagctaggtgagggtaaacattttgaattaccagagaag
aaaagaaacgatgtttgcaccattatgtatacaagtggaacaactggtgatcctaaagga
gtcttgcttacaaatgagagcattattcatctccttgaaggtgttaaaaaattgcttaaa
actatcaatgaagagttaaccagtaaagatgtttatctctcatatctacctctggctcac
atcttcgatcgcgtgattgaggagctgtttatttatgaagcagcttctatcggattctgg
cgaggggatgttaagatattgatagaagacattgctgcattgaaaccaactattttctgt
gctgttcctcgcgtgctagagagaatatacacaggtcttcagcagaaactctctgatggt
ggttccataaaaaaggcattattcaactttgcattcaactacaaacataagaacatggag
aaagggaagactcatgaacaagcatctcctatctgtgacaaagttgtatttaaaaaggtg
aaagaagggttgggaggaaacgtgcgtctgatcctctcaggagcagctcctcttgcagct
cacatcgaatctttccttcgagttgttgcatgtgctcatgttttgcaaggatatggtcta
acagagagctgtggtgggagttttgtgtccatcccaaatgagcttgcaatgcttggaacg
gttggtccaccagtcccaaacgttgacataaggctcgagtcagttccagagatggggtat
gacgctcttgcaagcaagccgcgtggagagatttgcatcagaggaaagacattgttctca
ggatattataaacgtgaagacctcacacaagaagtcctcattgatggttggcttcacact
ggtgatgttggtgagtggcaaccagatggagccatgaaaatcatcgaccgtaagaagaac
atcttcaaactctcacaaggagaatacgttgcggttgagaacctggagaacatttacagt
cacgtagccgccattgaatcgatatgggtatatggaaacagctatgagtcttacttagta
gctgtggtatgtccaagcaagattcagattgaacattgggccaaagaacacaatgtttca
ggagattttgagtctatctgtcaaaaccaaaagactaaagagtttatacttggagaattc
aacagagtagccaaagacaaaaagctgaaggggtttgagctgatcaaaggtgttcattta
gacacagtcccattcgacatggaaagagatctcatcacaccttcttacaagaagaagagg
cctcagcttctcaagtactatcagaaagagatcgatgaaatgtataacaaaacaaagaag
tga
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