Capsella rubella (pink shepherd's-purse): 17895169
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Entry
17895169 CDS
T02984
Name
(RefSeq) protein argonaute 7
KO
K11593
eukaryotic translation initiation factor 2C
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17895169
03036 Chromosome and associated proteins [BR:
crb03036
]
17895169
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
17895169
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
17895169
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
17895169
microRNA pathway
RISC loading complex
17895169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
Piwi_N
ArgoMid
DUF6079_5th
Motif
Other DBs
NCBI-GeneID:
17895169
NCBI-ProteinID:
XP_006300676
UniProt:
R0HUS3
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MEDKTKTQSHHHQSTNKHIPNSKSRTPLLHKPYHHVQTNPPPFLFHPSSHHNLNLQSSYY
YYYYCYFYSQFHNSLPPPLLPLPPPPPPLPLPPLLPLPPQNSMTRFNKSLPVSQVVERKQ
QQQQKKKIHKDNNNNKVSESVATEAAALVVAKRPDSGGQEGSVIYLLANHFLVKFDPLQR
IYHYNVEISPQPSKEIARMIKQKLVETERNSFSGVVPAFDGRKNIYSPVEFQDDRLEFFV
NLPIPSCKAVMNHGDLREKQPQKKIDKLFRVNMRLVSKFDGKEQRKEGEDWAPLPPEYIH
ALDVILRENPMEKCTSIGRSFYSSSMGGSKEIGGGAVGLRGFFQSLRHTQQGLALNMDLS
ITAFHESIGVIAYLQKRLEFLKDLPRNKGRELSLEEKREVEKALKNIRVFVCHRETVQRY
RVYGLTEEITENLWFPDRDGKHLRLMSYFKDHYGYEIQYKNLPCLQISRARPCYLPMELC
MICEGQKFLGKLSDDQAAKIMKMGCQKPNERKAIIDNVMAGSVGPSSGNQTREFNLEVSK
EMTLLKGRILLPPKLKLDRPKNLKESRVLKGTRIERWALMSIGGSSDQKCTIPKFINELT
QKCEHLGVFLSKNTISSTFFEPSHILNNISLLESKLKEIQRAASNNLQLLICVMEKKHKG
YGDLKRIAETRIGVVTQCCLYPNITKLSSQFVSNLALKINAKIGGSMTELYNSIPSHIPR
LLRHDEPVIFMGADVTHPHPFDDCSPSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDL
DLMVKELLDDFYKAVNKLPNRIIFFRDGVSETQFKKVLQEELQSIKAACSKFQDYNPSIT
FAVVQKRHHTRLFRCEPDSENIPPGTVVDTVITHPNEFDFYLCSHLGVKGTSRPTHYHIL
WDENKFTSDELQRLVYNLCHTFVRCTKPISIVPPAYYAHLAAYRGRLYIERSSESMNHHH
PSSVSRVGPPKTIPLPKLSDNVKNLMFYC
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaaactaaaactcagagtcatcatcatcagagtaccaacaaacacatcccc
aattccaaatcaagaacgcctcttctccacaagccttatcaccatgttcaaaccaatcct
cctccttttctcttccacccttcttctcaccataacctcaatcttcagtctagctactac
tactattactactgttacttctactctcaatttcacaactctcttcctcctcctcttctt
cctctccctcctcctcctcctcctcttcctcttcctcctttgcttcctcttcctcctcaa
aactcaatgactcgtttcaacaaatctcttcctgtttctcaagttgtggaaaggaagcag
caacaacagcagaagaagaagatacacaaagacaacaacaacaacaaagtgagtgagtcc
gtagcaacagaagccgcagcattagtggttgctaaaagaccagactctggtggtcaagaa
ggctctgtcatttatcttctcgccaatcattttcttgtaaagttcgatcctttgcagagg
atttaccattacaacgttgagatctctccgcaaccttcaaaagaaattgcaaggatgatc
aaacagaagcttgtggagacagagcggaatagtttctctggtgttgttccggcttttgac
ggtaggaaaaacatttacagccctgttgagtttcaggacgataggcttgagttttttgtt
aatctccctataccatcttgcaaagctgtgatgaatcatggtgacttgcgagagaagcaa
cctcaaaagaagattgataaactgtttagggttaacatgaggcttgtgtccaagtttgat
ggtaaggaacagaggaaggaaggagaagattgggctcctctgcctccagaatacattcat
gctcttgatgttatcttgagggagaatccaatggagaagtgtacatctattggaagatcg
ttttactcgagttctatgggtggatccaaggagattggaggaggagctgttggactcaga
gggtttttccagagtcttagacatactcaacaaggtttagccctcaacatggatctctca
atcacagctttccatgaaagcattggagtaatagcttacttgcagaagcggctagagttt
ctcaaggaccttcctaggaacaaaggtagagaactgagcctggaggaaaagagagaagtg
gagaaagcacttaagaacataagagtctttgtttgccatagagaaactgttcagaggtat
cgggtttacgggttaacagaggagattaccgagaatctatggtttcctgatagagatggg
aagcatttaaggcttatgagctactttaaagatcattatggttatgagattcagtataaa
aatttgccgtgtctgcagatcagtagggcaagaccttgttaccttcctatggaactatgt
atgatctgtgaaggtcaaaagtttcttgggaagctttcagatgatcaagctgcaaagatc
atgaaaatgggctgccaaaaaccaaatgaaaggaaagctatcatagataacgttatggca
ggatcggttggtccatcaagcggaaaccaaacaagagaattcaaccttgaagtttcaaaa
gaaatgacgttgctgaaaggaagaatacttctgcctccaaagcttaaacttgaccggcca
aagaaccttaaagagagtagagttcttaaaggaacccgaatcgagagatgggctttgatg
agtattggaggcagctcggatcagaaatgtaccattcccaagttcataaacgagctcact
caaaagtgtgagcatttgggagtcttcctaagcaagaacacaataagcagcaccttcttt
gaaccatcacacatactcaacaacatttcacttctcgagtcaaaactgaaggagattcaa
agagccgcatctaacaatctccagctgcttatctgtgtgatggagaagaaacacaaaggg
tacggagacctaaaaaggatagcagagacaagaattggcgttgtgacgcaatgctgctta
taccctaacatcacaaagctcagttctcagttcgtttcaaacttggctctcaagattaac
gccaagattggtggatccatgactgagctctacaactcgataccttctcacatcccaaga
ttgcttagacatgatgagcctgtgatcttcatgggagctgatgtaacgcatcctcatccg
tttgatgattgtagcccttcagtagcggctgtggtcgggagcataaactggcctgaagct
aacagatacgtttcaagaatgaggtctcagactcataggcaagagatcattcaagatctt
gacttgatggtcaaggaacttcttgatgatttctacaaagcagttaacaagcttcctaat
cggatcatattcttcagagacggtgtgagcgagacacagttcaagaaagtccttcaagaa
gagctccaatccatcaaagccgcttgttctaagttccaagactacaatccgagcatcaca
ttcgccgtggtccaaaaaagacaccacacgagactgttcagatgcgagccagacagtgag
aacatccctccaggaacagtagtcgatacagtgataactcatccgaatgagtttgatttc
tacctctgtagccatttgggagtgaagggcacgagcaggccaacgcattaccacatccta
tgggacgaaaacaagtttacttcagacgagttgcaaagactcgtgtacaacttatgtcac
actttcgtgaggtgcacgaaacctatatcgattgtaccaccggcttattatgctcacctt
gcagcgtacagaggaaggctatacatagagagatcatctgaatctatgaatcatcatcat
ccttcctctgtgtctcgagttggtcctccaaagactattcctctccctaaactaagtgat
aatgtcaagaatctcatgttttactgctga
DBGET
integrated database retrieval system
