Capsella rubella (pink shepherd's-purse): 17895408
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Entry
17895408 CDS
T02984
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17895408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17895408
03036 Chromosome and associated proteins [BR:
crb03036
]
17895408
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
17895408
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
17895408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
17895408
NCBI-ProteinID:
XP_006300673
UniProt:
R0GD94
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MTSLTIQPIPDISWMAGNLDSRKKRRISLDGVTALSEHSKEIIDSLPMLNSPDYFLKPCM
NELIEREIENPDYCSRVPDFTIGRIGYGYIKFLGNTDVRRLDLDQIVKFQRHEVIVYDDE
SSKPVVGEGLNKVAEVTLIVNIPNLTLGNEQVDHIAYKLKQSTERQGATFISFDPDKGLW
KFLVPHFSRFGLSDDEAEDIAMTDAPGLGDPVGQEGDKVADINEEHQMETSQPELSHSLP
AHLGLDPGKMKEMRMLMFPNEDLDESDDFGEQTSHHMASLTKQNVRPSQRISQRNSHQDT
PPVLRKTPLALLEYNPVNDKSSPGSILMVQQNKNLAVRKSKMRGFELDISHGTPLSDNYS
RNVVDAALFMGRSFRAGWGPNGVLFHTGKPICSSSSQMVLSSVINKERIAIDKVVWDRKE
EVQKELIDFAFEAPLNLHKKLDHLEEEVEFGSFSLKLQRVVTDRVVLSGICRSYIDIIEK
QLEVAGLSTSAKLFLMHQVMVWELIKVLFSERQSTERLNYAASDNEEDMMQDLKEDSAEV
DTEALPVIRRAEFSYWLQESVSPRVQEDVSGLNGSGYLDHLFFLLTGRELDSAVELAISK
GDVRLACLLSQAGGSTVNRNDILQQLHLWRRNGLDFNYIEKGRIKLYELLAGNIHDALQD
FTIDWKRFLGLLMWHHLPPDSSLPVIFRNYQLLLDQEKAPWPVPIYIDEGPADGFVSNDK
HSDLLYYLMLLHSKEEEEVGFLKTMFSAFSSTDDPLDYHMIWHHRGILEAVGAFTSDDLH
TLDMGFIAQLLSQGLCHWAIYVVLHIPFREDQPYLHVNVIREILFQFCETWSSMESQRKF
IKDLGIPSEWMHEALAVYYNYHGDFIKALDHFIECANWQRAHFIFMTSVAHSLFLSANHS
EIWRIATSMDDRKSEIENWDLGAGIYMAFYLLKSSLQEDADTMVELEPLESTNESCRSFV
GRLNESLAVWGDRLPVEARVAYSKMAEEICELLLSDLSKDPSRETQLSCFETAFNAPLQE
DVRSTHLQDAVSLFSLYLSEGGQISA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcttactattcaaccaattccagatatttcatggatggctggaaatttggac
tcgcgaaagaaaagaaggatctccttagatggagttactgccttgagtgaacattccaaa
gagatcattgattcattgcctatgttaaattcacctgactacttcttgaagccatgcatg
aatgagttgattgagcgagaaattgaaaaccctgattattgcagcagggttcctgatttc
acaattggtaggattggttacggttatattaagtttcttgggaatacagatgttagaagg
ttagacctggatcagatagttaagtttcaaaggcacgaggtgattgtttatgatgatgag
agctctaagccagttgttggcgagggacttaataaggttgctgaggtgactctgattgta
aacataccaaatcttactttggggaatgaacaagttgaccatattgcttataaattaaaa
cagagcactgaaagacaaggggcaactttcatctcatttgatcctgataaaggtttatgg
aagtttttggttcctcatttcagcagatttgggttgagtgatgatgaggcagaagatatt
gctatgactgatgccccaggtttgggagatcccgtagggcaggagggtgacaaggtagct
gacattaatgaagaacatcagatggaaacttcccagccagaactttctcactctcttcct
gctcatctaggacttgatcctggaaagatgaaagaaatgagaatgctgatgtttcctaat
gaagatctagacgaaagtgatgattttggagagcaaacttcccatcatatggcatccttg
actaaacaaaatgtaagaccttcacagagaatttctcaaagaaatagtcatcaagatact
ccaccggtcttgaggaaaactccacttgctttgctagagtataaccctgttaatgataaa
agctccccaggtagtatcttgatggtccaacaaaataagaatctggcggtgagaaagtcg
aaaatgagaggtttcgagctagacatcagccatggcacaccattatctgataactattct
cgcaatgttgtggatgcagcattatttatgggaagatctttccgagcaggttggggacca
aatggtgtcctttttcacactggtaagccaatatgtagctccagttcccagatggtattg
tcttctgtgatcaataaagaaaggatagcaattgacaaagtggtttgggatagaaaggaa
gaagttcagaaagaacttattgattttgcattcgaggctcccttaaatctccacaagaaa
ttggatcatctagaagaagaagttgagtttggctctttcagtcttaaacttcagagagtg
gtcactgatcgtgtagttctttctggtatctgccgaagttatattgatataattgagaaa
cagctagaggttgctgggttgtcaacatctgcaaagctgtttttgatgcaccaagtcatg
gtgtgggaactcataaaagttctcttttctgagagacagagtactgaacgtttgaattat
gcagcttctgataatgaggaagacatgatgcaggatttgaaggaagattctgcagaagtt
gatacagaagctcttccagttatccgaagagcagaattcagttattggctccaagaaagt
gtcagtccgcgtgtacaagaagatgtgagtggtctaaatggttctggctatcttgatcac
ttattctttcttctaactggacgagaacttgattcagcagtagagcttgccatatctaag
ggagatgttagacttgcatgtttgttaagccaggctggtggatcaactgtaaaccgcaat
gatatcttgcagcagcttcacctttggagaaggaatgggctggattttaattacatcgag
aaggggagaattaagctttacgaattgcttgctggtaatatccatgatgcgttacaagat
tttacaattgactggaagagattcctagggttgttaatgtggcatcatctgcctcccgac
agttcattacctgtcatcttcagaaattatcaactcctactagatcaggaaaaagctcca
tggcccgttccaatatatattgacgaaggacctgcagatgggtttgtaagcaacgacaag
cattctgaccttttgtattatcttatgcttctgcacagcaaagaagaggaagaagttggt
ttcctgaagactatgttcagtgccttctcttcaactgacgatccacttgactatcatatg
atctggcaccatcgaggaatcctagaagctgttggggcattcacttcagatgatcttcac
actctcgatatgggatttattgcacagcttctctctcagggtctttgtcattgggctatc
tacgttgttctgcacatacccttccgtgaagatcaaccatatctacacgtcaatgtcatt
cgggaaatcctgttccagttctgtgaaacttggagttctatggaatcacaacggaaattt
atcaaggacttgggtatcccttctgaatggatgcatgaagctctggcagtttattacaat
taccatggagatttcataaaggctcttgaccactttattgaatgtgcaaactggcaaaga
gctcatttcatttttatgacgtcagttgcccattcattatttttgtcagcgaaccattca
gaaatatggagaattgccacttcaatggatgatcgcaaatctgagattgaaaactgggat
ttgggtgccgggatttacatggcattttatttacttaagagttcactgcaagaagatgct
gatacgatggtcgaactggaaccccttgagagcacaaacgagtcgtgcagaagtttcgtc
ggtcgtttaaacgaatcattggctgtttggggtgacagattaccagttgaagctagagtg
gcatattcaaagatggcagaggaaatatgcgagttgctactgtcagatctgagtaaggat
ccaagtcgagagactcagctaagctgttttgagacagccttcaatgccccattacaagaa
gatgtgagatcaacacatctgcaagatgctgtgtcactattctctctatatctttcagaa
ggcggccaaatctcagcttag
DBGET
integrated database retrieval system
