Capsella rubella (pink shepherd's-purse): 17895511
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Entry
17895511 CDS
T02984
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
17895511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17895511
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17895511
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
17895511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Merozoite_SPAM
TMEM51
PPP4R2
PFF1_TM
RNA_pol_3_Rpc31
Nop14
RRM_ESF1
Piezo_TM1-24
RPA43_OB
ECM10
RNA_pol_Rpc4
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
17895511
NCBI-ProteinID:
XP_006302255
UniProt:
R0IEK3
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MAGEASSSRLKRQRVPSISQSVCPEDGGGGDVAVGTLFELDLLECPSCCHSLTSPIFQCD
NGHIACSSCCAKTRNECLSCKLPIGKYRSRIMERVVEAVIVPLPSVAKNAFAGEASSSRL
NRQRVPSVVGEECENGEGDVVVRSGKLFELNLLNCPVCSDALTGLIFQCDNEHIACSSCC
TKLRHICPSCTLPIGIYRCRIMEEVVKAVIVPCPNAKHGCTETFSYGKELIHEKKCSFAL
CYCPASNCNYSGVYKDLYSHYAANHKNIYKRFSYGYSHHACLGIDCNIVVFQEYGDGPLV
VVQCFKEPQGVFLTANCIAPSAPGVGNLSYDLSYSTAGKTVTFKSSEMNRIQKVSFQTPE
KDFMIIPDYLLSRVGLLKSIRICIRNLGKEKEKTEDEEEEEEDEDEDEDEDEEEEDEDEE
EELEEEEEEEVEEDEDYGIIIT
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccggagaagcttcgagcagccgcctaaagagacaacgagtaccctccatttctcaa
tccgtatgcccagaagatggtggcggaggagatgttgcggtgggaacattgttcgagtta
gatcttctcgaatgtcccagttgttgtcactcactcaccagccctatctttcagtgtgac
aatggtcatatcgcgtgttcttcttgttgtgctaaaacgaggaacgaatgcctttcctgc
aagttgcctattggtaagtatcgatctagaataatggagagagttgttgaagcagtcatt
gttcctttgcccagtgtagccaaaaatgccttcgctggagaagcgtcgagcagccgccta
aataggcaacgagttccttctgttgttggagaagaatgcgagaatggtgaaggagatgtg
gtggtacgatctgggaagttgttcgagctaaatcttctcaattgtcctgtttgtagtgat
gcactcacgggtcttatctttcagtgtgacaatgaacatatagcttgttcttcttgctgc
actaaactaaggcacatatgcccttcctgcactttgcccattggtatctatcgatgcaga
ataatggaggaagttgtcaaagcagtcattgtcccttgcccaaacgccaaacatggctgc
accgagacattctcttatggcaaagagttaatccatgagaagaaatgcagctttgctctg
tgctattgtcctgcgtcgaactgcaactactcgggtgtgtacaaggatctatacagtcac
tacgctgctaatcacaagaacatttacaagcgtttcagttacggctattcccatcatgca
tgcttgggcatcgattgtaatattgtggtctttcaggaatatggagatggtccattggtt
gtggttcagtgtttcaaggaaccacaaggagtgtttttgactgcgaactgtatagcacct
tctgctcctggagttggaaatctctcctatgatctatcatactccacagcaggtaaaact
gtgacgtttaaatcgtcggagatgaataggatccaaaaagtgagcttccaaactccggag
aaggacttcatgattattcctgactatttattgagtcgggtgggtttgttaaagagtatc
cgtatttgcatccgcaacttaggaaaagaaaaagaaaaaactgaagatgaagaagaagag
gaagaagatgaagatgaagatgaagatgaagatgaagaggaagaagatgaagatgaagaa
gaggaacttgaagaagaagaagaagaagaagttgaagaagatgaagactacggaattatc
ataacatag
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