Capsella rubella (pink shepherd's-purse): 17895688
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Entry
17895688 CDS
T02984
Name
(RefSeq) transcription factor PERIANTHIA isoform X1
KO
K14431
transcription factor TGA
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17895688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17895688
Transcription factors [BR:
crb03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
17895688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
CCDC32
Arena_RNA_pol
FRG1
WDR18_C
Motif
Other DBs
NCBI-GeneID:
17895688
NCBI-ProteinID:
XP_006300957
UniProt:
R0I710
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MQSSFKTVPFNPDFYSQSSYFFRGDSCLEDFHQPVNGFHHDEPIDLSPNVTIASANLHYT
TFDTVMECGGLRERLEREDECLDTEQLVYQKETRLVGGGGGGGGGGEVNISLENWCDSVS
AMADNSQHTDTSTDIDTDDKTQLNGVRQGMVLATNCSDQSKVKSSEQRTLRRLAQNREAA
RKSRLRKKAYVQQLENSRIRLAQLEEELKRVRQQGNLAESGVTADHTHLAAGNGAFSFEL
EYTRWKEEHQRLINDLRSGVNSQLGDNELRVLVDAVMSHYDEIFRLKGIGTKVDVFHMLS
GMWKTPAERFFMWLGGFRSSELLKILGNHVDPLTDQQLIGICNLQQSSQQAEDALSQGME
ALQQSLLETLSSASMGPNSSANVADYMGHMAMAMGKLGTLENFLRQADLLRQQTLQQLHR
ILTTRQAARAFLVIHDYISRLRALSSLWLARPRD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcttcaagaccgttcctttcaaccctgatttctactctcagtcctcttac
ttcttcagaggagatagttgtcttgaagattttcatcaaccagtcaatgggtttcaccat
gatgaacctatcgatttaagtccaaatgtcactattgcttcggccaacttacactacacg
acgtttgatacggtaatggagtgtggtggcttgagggagaggcttgaaagagaagatgag
tgtttggatacagagcagttagtgtaccagaaagagacaaggttagtaggaggaggagga
ggaggaggaggaggaggtgaagtgaacatcagtttagagaattggtgtgattcggtttca
gctatggctgataacagtcaacatactgacacttccacagatattgatactgatgacaag
actcagttaaatggagttcgacaagggatggttttggctacaaattgttcagatcaatcc
aaggtgaaatctagtgaacaaaggacacttcgtcgactagctcagaaccgggaagctgct
aggaaaagtcgactaaggaaaaaagcatatgttcagcaacttgagaatagtcgaatcagg
cttgcgcagctggaagaagagcttaaacgagttcgccaacagggaaatttggctgagagt
ggagttacagcggatcacacgcatttggcagctggaaatggtgccttttcatttgaattg
gaatatacacgttggaaagaggaacatcaaagactgatcaacgacttaagatcgggtgtg
aattcacagttaggtgacaacgagcttcgcgtgctagtcgatgctgtcatgagtcactac
gatgaaatattcaggctaaagggcattggcactaaagttgatgtctttcatatgctctca
ggcatgtggaaaacacctgctgagaggtttttcatgtggttaggtggatttagatcatct
gagctacttaagatattggggaaccatgtggatccattgactgatcagcagttgataggc
atttgcaaccttcaacagtcatctcagcaagcagaagatgcattgtcacaaggcatggaa
gctctgcaacaatcgcttctcgagactctttcctctgcttcaatgggtccaaactcttca
gcaaatgttgcagactatatgggtcatatggctatggccatgggaaaacttggcactctc
gaaaacttccttcgccaggcagatctattaaggcaacaaactctgcaacagctacataga
attctcaccacacggcaagctgctcgcgcctttttggtcatccacgactatatttctcgg
cttagagcacttagctcactatggttagcccgacctagagactag
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