Capsella rubella (pink shepherd's-purse): 17895753
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Entry
17895753 CDS
T02984
Name
(RefSeq) auxin response factor 1 isoform X1
KO
K14486
auxin response factor
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17895753
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
17895753
NCBI-ProteinID:
XP_006300434
UniProt:
R0GC66
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MAATNPSSEKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGL
EQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPISPDAPVQEPEKCT
VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIF
RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNVPSSVISSH
SMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEG
EEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANST
PSSQPQPPQRNKRPRPPGLPAPTTGPSAAVTPDSVWKSPADTPSSVPLFSPPAKAAMFGP
GGNKSFGVSIGSAFWPTHADSAAESFASAFNNESTEKKQTNGNVCRLFGFELVENVNVDE
CFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGSGDPEKSSLRSPQESQSRQ
IRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFDIKGELIESTKKWQVVYTDDEDD
MMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLTVNARMQPKNDVEENGNTEGRSSS
MAGSR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaccaatccttcatctgaaaaacctggaggggttttaagtgatgctctatgt
agggagctctggcatgcctgtgctggacctcttgtaaccctacctcgtgaaggggaacga
gtttattatttccctgaaggccacatggagcagcttgaggcatcaatgcaccaaggtttg
gagcaacagatgccttccttcaatctcccatctaagattctctgtaaagtgatcaacatc
cagcgcagggcagagcccgagactgacgaagtatatgcacagataaccttattgccagaa
ctggatcaaagtgaacccatcagcccagatgcccctgttcaagaacctgaaaagtgcaca
gtacattcattttgcaagacactaactgcttcagacacaagcacacatggtggattctct
gtgctacggagacatgcagatgattgtcttccacccttggatatgtcccaacaaccacca
tggcaagaattggttgcaactgatttgcacaataatgaatggcattttaggcacattttc
cgagggcaaccaaggcgccatttgctaacaactggatggagtgtttttgttagctcgaag
aaactagtggctggtgatgctttcatattcttaagaggtgagaatgaagagctccgagta
ggtgttaggaggcacatgagacaacagacgaatgtcccgtcttctgttatttcaagtcat
agcatgcatatcggggtccttgcaactgcagctcatgccattacaacaggaacaatcttt
tctgtcttctacaagccaaggacaagtaggtcagagtttattgtgagcgtcaataggtat
ctcgaagctaagacccagaagctgtctgtaggcatgcgtttcaagatgagattcgagggt
gaagaagctcctgagaaaaggttcagtggcacaatagttggcgttcaggaaaacaagtcg
tcggtctggcatgattctgaatggaggtcgctgaaggttcaatgggacgagccctcatct
gtatttcgtcctgaaagagtctcaccatgggaacttgagcccctagttgcaaacagtacc
ccttcttcacaacctcagcctccacaaaggaacaaacgaccaagacctcctggtttgcct
gcaccaaccaccggtccatctgctgcagttactccagatagtgtgtggaaatccccggca
gacactccttcatcggtgccattattctctcctcctgccaaagctgctatgtttggtcct
ggtgggaacaaatcttttggagtatccattggatcagccttttggcccacccatgcagat
agtgcagctgaatcctttgcttcagcgtttaacaatgaatctactgaaaagaaacaaacc
aatggaaatgtctgcaggctttttgggttcgagctagttgaaaatgttaatgtggatgaa
tgtttctctgctgcctctgtgtctggtgctgtcgctgtagatcaacctgtgccatccaat
gagtttgactctggtcagcaatctgagccgttaaacatcaaccaatctgatattccgtcg
ggaagtggtgaccctgagaaatcctctttgaggtctcctcaagaatcacaaagtagacag
atacgtagttgcacaaaggtgcacatgcaaggcagtgcagtagggagagctgttgatttg
acaaggtcagagtgctacgaagatttatttaagaagctggaagagatgttcgatatcaag
ggtgaactcatcgaatctacgaaaaaatggcaagttgtctacactgatgatgaggatgac
atgatgatggttggtgatgatccatggaatgagttctgtggaatggtgagaaagatattt
atctacacaccagaggaagtgaagaaactttcacccaagaacaaactaacagtcaatgca
aggatgcagccaaaaaatgatgtagaggaaaatggaaacacagagggaaggtcatcgtcc
atggctggatcaagatga
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